Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 AL353705.2-201ENST00000428243 662 ntBASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 AC105233.2-201ENST00000523697 349 ntBASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 AF228730.5-201ENST00000530288 346 ntBASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 AC055876.2-201ENST00000531834 546 ntBASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 AL031055.1-201ENST00000606362 631 ntBASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 AC004790.1-201ENST00000612686 536 ntBASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 AL355994.2-201ENST00000447882 704 ntBASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 CTBP2P3-201ENST00000585629 1255 ntBASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO4Q2I0M5 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 RN7SL828P-201ENST00000607615 303 ntBASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO4Q2I0M5 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RSPO4Q2I0M5 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.27■□□□□ 0.19
RSPO4Q2I0M5 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms