Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KCNA1Q09470 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KCNA1Q09470 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KCNA1Q09470 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KCNA1Q09470 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.6■□□□□ 0.57
KCNA1Q09470 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KCNA1Q09470 AL021920.2-201ENST00000624828 1351 ntBASIC18.6■□□□□ 0.57
KCNA1Q09470 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KCNA1Q09470 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KCNA1Q09470 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
KCNA1Q09470 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.6■□□□□ 0.57
KCNA1Q09470 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KCNA1Q09470 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.6■□□□□ 0.57
KCNA1Q09470 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.6■□□□□ 0.57
KCNA1Q09470 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.6■□□□□ 0.57
KCNA1Q09470 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.6■□□□□ 0.57
KCNA1Q09470 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.6■□□□□ 0.57
KCNA1Q09470 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.6■□□□□ 0.57
KCNA1Q09470 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
KCNA1Q09470 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KCNA1Q09470 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KCNA1Q09470 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
KCNA1Q09470 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
KCNA1Q09470 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KCNA1Q09470 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.6■□□□□ 0.57
KCNA1Q09470 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KCNA1Q09470 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KCNA1Q09470 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KCNA1Q09470 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KCNA1Q09470 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KCNA1Q09470 AC079328.2-201ENST00000561241 3354 ntBASIC18.59■□□□□ 0.57
KCNA1Q09470 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
KCNA1Q09470 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.59■□□□□ 0.57
KCNA1Q09470 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
KCNA1Q09470 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
KCNA1Q09470 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
KCNA1Q09470 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KCNA1Q09470 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.59■□□□□ 0.57
KCNA1Q09470 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
KCNA1Q09470 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.59■□□□□ 0.57
KCNA1Q09470 PMS2P1-201ENST00000431037 1228 ntBASIC18.59■□□□□ 0.57
KCNA1Q09470 PRSS29P-201ENST00000440800 595 ntBASIC18.59■□□□□ 0.57
KCNA1Q09470 VN2R19P-201ENST00000442399 1052 ntBASIC18.59■□□□□ 0.57
KCNA1Q09470 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.59■□□□□ 0.57
KCNA1Q09470 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.59■□□□□ 0.57
KCNA1Q09470 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.59■□□□□ 0.57
KCNA1Q09470 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KCNA1Q09470 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
KCNA1Q09470 ACTL9-202ENST00000612068 1252 ntBASIC18.59■□□□□ 0.57
KCNA1Q09470 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KCNA1Q09470 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
KCNA1Q09470 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KCNA1Q09470 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KCNA1Q09470 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
KCNA1Q09470 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
KCNA1Q09470 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KCNA1Q09470 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KCNA1Q09470 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KCNA1Q09470 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
KCNA1Q09470 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KCNA1Q09470 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.59■□□□□ 0.57
KCNA1Q09470 AL391256.1-201ENST00000443260 1855 ntBASIC18.58■□□□□ 0.57
KCNA1Q09470 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
KCNA1Q09470 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
KCNA1Q09470 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
KCNA1Q09470 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
KCNA1Q09470 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
KCNA1Q09470 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.58■□□□□ 0.56
KCNA1Q09470 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
KCNA1Q09470 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.58■□□□□ 0.56
KCNA1Q09470 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KCNA1Q09470 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.58■□□□□ 0.56
KCNA1Q09470 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.58■□□□□ 0.56
KCNA1Q09470 AP000347.1-202ENST00000435868 847 ntBASIC18.58■□□□□ 0.56
KCNA1Q09470 HCG4B-203ENST00000450128 991 ntBASIC18.58■□□□□ 0.56
KCNA1Q09470 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.58■□□□□ 0.56
KCNA1Q09470 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.58■□□□□ 0.56
KCNA1Q09470 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.58■□□□□ 0.56
KCNA1Q09470 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.58■□□□□ 0.56
KCNA1Q09470 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.58■□□□□ 0.56
KCNA1Q09470 AC010654.1-201ENST00000615722 808 ntBASIC18.58■□□□□ 0.56
KCNA1Q09470 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.58■□□□□ 0.56
KCNA1Q09470 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
KCNA1Q09470 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.58■□□□□ 0.56
KCNA1Q09470 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KCNA1Q09470 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.58■□□□□ 0.56
KCNA1Q09470 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
KCNA1Q09470 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
KCNA1Q09470 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KCNA1Q09470 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
KCNA1Q09470 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.58■□□□□ 0.56
KCNA1Q09470 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KCNA1Q09470 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
KCNA1Q09470 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KCNA1Q09470 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
KCNA1Q09470 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
KCNA1Q09470 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
KCNA1Q09470 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.57■□□□□ 0.56
KCNA1Q09470 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.57■□□□□ 0.56
KCNA1Q09470 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms