Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
HTRA3P83110 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC19.34■□□□□ 0.69
HTRA3P83110 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC19.34■□□□□ 0.69
HTRA3P83110 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
HTRA3P83110 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.34■□□□□ 0.69
HTRA3P83110 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC19.34■□□□□ 0.69
HTRA3P83110 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HTRA3P83110 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HTRA3P83110 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HTRA3P83110 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC19.34■□□□□ 0.69
HTRA3P83110 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.34■□□□□ 0.69
HTRA3P83110 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HTRA3P83110 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HTRA3P83110 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HTRA3P83110 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HTRA3P83110 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
HTRA3P83110 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HTRA3P83110 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HTRA3P83110 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
HTRA3P83110 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HTRA3P83110 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.69
HTRA3P83110 TP73-213ENST00000604479 1623 ntTSL 5 BASIC19.33■□□□□ 0.69
HTRA3P83110 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HTRA3P83110 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.33■□□□□ 0.69
HTRA3P83110 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HTRA3P83110 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.33■□□□□ 0.69
HTRA3P83110 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HTRA3P83110 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HTRA3P83110 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HTRA3P83110 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.33■□□□□ 0.68
HTRA3P83110 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.33■□□□□ 0.68
HTRA3P83110 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HTRA3P83110 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC19.33■□□□□ 0.68
HTRA3P83110 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC19.33■□□□□ 0.68
HTRA3P83110 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HTRA3P83110 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC19.33■□□□□ 0.68
HTRA3P83110 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC19.33■□□□□ 0.68
HTRA3P83110 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC19.33■□□□□ 0.68
HTRA3P83110 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC19.33■□□□□ 0.68
HTRA3P83110 AC244669.2-201ENST00000612320 853 ntBASIC19.33■□□□□ 0.68
HTRA3P83110 AL008638.5-201ENST00000623814 1298 ntBASIC19.33■□□□□ 0.68
HTRA3P83110 AC073439.1-201ENST00000624121 1774 ntBASIC19.33■□□□□ 0.68
HTRA3P83110 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HTRA3P83110 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
HTRA3P83110 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
HTRA3P83110 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HTRA3P83110 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
HTRA3P83110 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.33■□□□□ 0.68
HTRA3P83110 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
HTRA3P83110 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HTRA3P83110 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.33■□□□□ 0.68
HTRA3P83110 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HTRA3P83110 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
HTRA3P83110 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HTRA3P83110 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HTRA3P83110 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HTRA3P83110 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HTRA3P83110 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.32■□□□□ 0.68
HTRA3P83110 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.32■□□□□ 0.68
HTRA3P83110 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HTRA3P83110 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HTRA3P83110 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
HTRA3P83110 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HTRA3P83110 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.32■□□□□ 0.68
HTRA3P83110 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HTRA3P83110 TSACC-208ENST00000481479 741 ntTSL 2 BASIC19.32■□□□□ 0.68
HTRA3P83110 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HTRA3P83110 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC19.32■□□□□ 0.68
HTRA3P83110 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC19.32■□□□□ 0.68
HTRA3P83110 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.32■□□□□ 0.68
HTRA3P83110 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HTRA3P83110 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC19.32■□□□□ 0.68
HTRA3P83110 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC19.32■□□□□ 0.68
HTRA3P83110 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HTRA3P83110 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
HTRA3P83110 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC19.32■□□□□ 0.68
HTRA3P83110 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HTRA3P83110 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.32■□□□□ 0.68
HTRA3P83110 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
HTRA3P83110 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.32■□□□□ 0.68
HTRA3P83110 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HTRA3P83110 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.32■□□□□ 0.68
HTRA3P83110 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.32■□□□□ 0.68
HTRA3P83110 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HTRA3P83110 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HTRA3P83110 KRT8P12-202ENST00000472924 1397 ntBASIC19.32■□□□□ 0.68
HTRA3P83110 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTRA3P83110 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.31■□□□□ 0.68
HTRA3P83110 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTRA3P83110 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTRA3P83110 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTRA3P83110 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HTRA3P83110 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
HTRA3P83110 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTRA3P83110 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.31■□□□□ 0.68
HTRA3P83110 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTRA3P83110 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC19.31■□□□□ 0.68
HTRA3P83110 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC19.31■□□□□ 0.68
HTRA3P83110 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
HTRA3P83110 KRT18P66-201ENST00000452970 1269 ntBASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms