Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.71■□□□□ 0.27
SRP54P61011 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.71■□□□□ 0.27
SRP54P61011 PRORSD1P-202ENST00000563365 2154 ntBASIC16.71■□□□□ 0.27
SRP54P61011 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SRP54P61011 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SRP54P61011 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRP54P61011 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SRP54P61011 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SRP54P61011 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SRP54P61011 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.71■□□□□ 0.27
SRP54P61011 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.71■□□□□ 0.27
SRP54P61011 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.71■□□□□ 0.27
SRP54P61011 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRP54P61011 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.71■□□□□ 0.27
SRP54P61011 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
SRP54P61011 AC112191.1-201ENST00000523689 701 ntBASIC16.71■□□□□ 0.27
SRP54P61011 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SRP54P61011 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.71■□□□□ 0.27
SRP54P61011 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.71■□□□□ 0.27
SRP54P61011 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.71■□□□□ 0.27
SRP54P61011 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRP54P61011 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRP54P61011 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRP54P61011 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SRP54P61011 NFIC-211ENST00000641145 8399 ntBASIC16.71■□□□□ 0.27
SRP54P61011 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRP54P61011 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.71■□□□□ 0.27
SRP54P61011 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRP54P61011 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.71■□□□□ 0.27
SRP54P61011 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SRP54P61011 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
SRP54P61011 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
SRP54P61011 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.26
SRP54P61011 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SRP54P61011 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRP54P61011 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SRP54P61011 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
SRP54P61011 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SRP54P61011 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.7■□□□□ 0.26
SRP54P61011 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.7■□□□□ 0.26
SRP54P61011 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SRP54P61011 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRP54P61011 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRP54P61011 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
SRP54P61011 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.7■□□□□ 0.26
SRP54P61011 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SRP54P61011 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRP54P61011 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRP54P61011 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.7■□□□□ 0.26
SRP54P61011 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SRP54P61011 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRP54P61011 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
SRP54P61011 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRP54P61011 SLC25A1P3-201ENST00000395415 828 ntBASIC16.7■□□□□ 0.26
SRP54P61011 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.7■□□□□ 0.26
SRP54P61011 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRP54P61011 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SRP54P61011 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.7■□□□□ 0.26
SRP54P61011 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.7■□□□□ 0.26
SRP54P61011 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.7■□□□□ 0.26
SRP54P61011 AC005412.3-201ENST00000580309 715 ntBASIC16.7■□□□□ 0.26
SRP54P61011 MIR4515-201ENST00000584082 81 ntBASIC16.7■□□□□ 0.26
SRP54P61011 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.7■□□□□ 0.26
SRP54P61011 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SRP54P61011 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRP54P61011 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SRP54P61011 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.7■□□□□ 0.26
SRP54P61011 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
SRP54P61011 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SRP54P61011 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRP54P61011 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SRP54P61011 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.7■□□□□ 0.26
SRP54P61011 KRT18P28-201ENST00000453838 1332 ntBASIC16.7■□□□□ 0.26
SRP54P61011 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.69■□□□□ 0.26
SRP54P61011 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SRP54P61011 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRP54P61011 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.69■□□□□ 0.26
SRP54P61011 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SRP54P61011 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRP54P61011 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRP54P61011 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.69■□□□□ 0.26
SRP54P61011 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRP54P61011 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRP54P61011 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SRP54P61011 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SRP54P61011 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRP54P61011 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRP54P61011 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRP54P61011 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.69■□□□□ 0.26
SRP54P61011 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
SRP54P61011 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRP54P61011 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRP54P61011 AC002056.1-201ENST00000395613 760 ntBASIC16.69■□□□□ 0.26
SRP54P61011 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.69■□□□□ 0.26
SRP54P61011 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
SRP54P61011 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.69■□□□□ 0.26
SRP54P61011 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.69■□□□□ 0.26
SRP54P61011 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.69■□□□□ 0.26
SRP54P61011 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.69■□□□□ 0.26
SRP54P61011 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms