Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 KRT8P10-201ENST00000450021 1447 ntBASIC14.8□□□□□ -0.04
CLDN12P56749 GPR89P-201ENST00000407924 1495 ntBASIC14.8□□□□□ -0.04
CLDN12P56749 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN12P56749 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.8□□□□□ -0.04
CLDN12P56749 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN12P56749 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.8□□□□□ -0.04
CLDN12P56749 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN12P56749 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN12P56749 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.8□□□□□ -0.04
CLDN12P56749 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN12P56749 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.8□□□□□ -0.04
CLDN12P56749 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.8□□□□□ -0.04
CLDN12P56749 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN12P56749 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN12P56749 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN12P56749 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.8□□□□□ -0.04
CLDN12P56749 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CLDN12P56749 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
CLDN12P56749 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN12P56749 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CLDN12P56749 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN12P56749 AP002414.2-201ENST00000591780 3365 ntBASIC14.79□□□□□ -0.04
CLDN12P56749 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.79□□□□□ -0.04
CLDN12P56749 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN12P56749 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN12P56749 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN12P56749 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN12P56749 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN12P56749 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN12P56749 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN12P56749 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.79□□□□□ -0.04
CLDN12P56749 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN12P56749 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.79□□□□□ -0.04
CLDN12P56749 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CLDN12P56749 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN12P56749 STARP1-201ENST00000397973 869 ntBASIC14.79□□□□□ -0.04
CLDN12P56749 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.79□□□□□ -0.04
CLDN12P56749 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.79□□□□□ -0.04
CLDN12P56749 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CLDN12P56749 AC111152.3-201ENST00000569699 673 ntBASIC14.79□□□□□ -0.04
CLDN12P56749 MIR4497-201ENST00000583208 89 ntBASIC14.79□□□□□ -0.04
CLDN12P56749 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.79□□□□□ -0.04
CLDN12P56749 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.79□□□□□ -0.04
CLDN12P56749 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.79□□□□□ -0.04
CLDN12P56749 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CLDN12P56749 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN12P56749 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN12P56749 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN12P56749 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN12P56749 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN12P56749 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN12P56749 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CLDN12P56749 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.78□□□□□ -0.04
CLDN12P56749 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDN12P56749 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN12P56749 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN12P56749 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN12P56749 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN12P56749 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CLDN12P56749 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN12P56749 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN12P56749 AL359075.1-203ENST00000462729 1002 ntBASIC14.78□□□□□ -0.04
CLDN12P56749 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.78□□□□□ -0.04
CLDN12P56749 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CLDN12P56749 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.78□□□□□ -0.04
CLDN12P56749 STK25P1-201ENST00000585406 838 ntBASIC14.78□□□□□ -0.04
CLDN12P56749 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CLDN12P56749 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CLDN12P56749 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.78□□□□□ -0.04
CLDN12P56749 AL390719.2-201ENST00000606993 987 ntBASIC14.78□□□□□ -0.04
CLDN12P56749 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CLDN12P56749 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN12P56749 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN12P56749 PKD1P5-201ENST00000532415 10291 ntBASIC14.78□□□□□ -0.04
CLDN12P56749 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDN12P56749 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CLDN12P56749 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CLDN12P56749 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDN12P56749 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDN12P56749 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CLDN12P56749 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.78□□□□□ -0.04
CLDN12P56749 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDN12P56749 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN12P56749 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN12P56749 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
CLDN12P56749 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN12P56749 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.78□□□□□ -0.04
CLDN12P56749 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.78□□□□□ -0.04
CLDN12P56749 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
CLDN12P56749 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN12P56749 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.77□□□□□ -0.04
CLDN12P56749 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN12P56749 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.77□□□□□ -0.04
CLDN12P56749 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
CLDN12P56749 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.77□□□□□ -0.04
CLDN12P56749 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
CLDN12P56749 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN12P56749 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
CLDN12P56749 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN12P56749 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms