Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.64□□□□□ -0.23
PAX9P55771 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PAX9P55771 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
PAX9P55771 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PAX9P55771 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PAX9P55771 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PAX9P55771 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PAX9P55771 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PAX9P55771 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PAX9P55771 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PAX9P55771 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PAX9P55771 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.63□□□□□ -0.23
PAX9P55771 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PAX9P55771 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.63□□□□□ -0.23
PAX9P55771 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
PAX9P55771 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.63□□□□□ -0.23
PAX9P55771 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
PAX9P55771 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.63□□□□□ -0.23
PAX9P55771 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PAX9P55771 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PAX9P55771 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
PAX9P55771 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.63□□□□□ -0.23
PAX9P55771 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PAX9P55771 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
PAX9P55771 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.63□□□□□ -0.23
PAX9P55771 RNF126P1-202ENST00000569893 925 ntBASIC13.63□□□□□ -0.23
PAX9P55771 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
PAX9P55771 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
PAX9P55771 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
PAX9P55771 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.63□□□□□ -0.23
PAX9P55771 AL031432.5-201ENST00000641059 760 ntBASIC13.63□□□□□ -0.23
PAX9P55771 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
PAX9P55771 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PAX9P55771 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PAX9P55771 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PAX9P55771 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.63□□□□□ -0.23
PAX9P55771 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.63□□□□□ -0.23
PAX9P55771 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PAX9P55771 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PAX9P55771 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PAX9P55771 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
PAX9P55771 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PAX9P55771 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PAX9P55771 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
PAX9P55771 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PAX9P55771 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PAX9P55771 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PAX9P55771 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
PAX9P55771 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PAX9P55771 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.62□□□□□ -0.23
PAX9P55771 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
PAX9P55771 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PAX9P55771 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PAX9P55771 AC132938.5-201ENST00000624980 1813 ntBASIC13.62□□□□□ -0.23
PAX9P55771 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.62□□□□□ -0.23
PAX9P55771 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PAX9P55771 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.62□□□□□ -0.23
PAX9P55771 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.62□□□□□ -0.23
PAX9P55771 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PAX9P55771 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC13.62□□□□□ -0.23
PAX9P55771 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PAX9P55771 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.62□□□□□ -0.23
PAX9P55771 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PAX9P55771 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PAX9P55771 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
PAX9P55771 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PAX9P55771 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PAX9P55771 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PAX9P55771 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PAX9P55771 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PAX9P55771 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PAX9P55771 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.62□□□□□ -0.23
PAX9P55771 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
PAX9P55771 FAM220CP-201ENST00000395253 831 ntBASIC13.62□□□□□ -0.23
PAX9P55771 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.62□□□□□ -0.23
PAX9P55771 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.62□□□□□ -0.23
PAX9P55771 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
PAX9P55771 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PAX9P55771 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PAX9P55771 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.62□□□□□ -0.23
PAX9P55771 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.62□□□□□ -0.23
PAX9P55771 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PAX9P55771 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.62□□□□□ -0.23
PAX9P55771 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
PAX9P55771 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PAX9P55771 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.62□□□□□ -0.23
PAX9P55771 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PAX9P55771 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PAX9P55771 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
PAX9P55771 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
PAX9P55771 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.62□□□□□ -0.23
PAX9P55771 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PAX9P55771 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
PAX9P55771 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
PAX9P55771 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PAX9P55771 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PAX9P55771 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PAX9P55771 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PAX9P55771 Z83836.1-201ENST00000624605 1642 ntBASIC13.61□□□□□ -0.23
PAX9P55771 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms