Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AC104989.1-201ENST00000519711 778 ntBASIC16.85■□□□□ 0.29
NUBP1P53384 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.85■□□□□ 0.29
NUBP1P53384 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NUBP1P53384 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.85■□□□□ 0.29
NUBP1P53384 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.85■□□□□ 0.29
NUBP1P53384 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC16.85■□□□□ 0.29
NUBP1P53384 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
NUBP1P53384 RN7SL219P-201ENST00000582872 296 ntBASIC16.85■□□□□ 0.29
NUBP1P53384 AC010487.2-201ENST00000594546 486 ntTSL 2 BASIC16.85■□□□□ 0.29
NUBP1P53384 AC063944.3-201ENST00000609969 533 ntBASIC16.85■□□□□ 0.29
NUBP1P53384 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NUBP1P53384 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.85■□□□□ 0.29
NUBP1P53384 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NUBP1P53384 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NUBP1P53384 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
NUBP1P53384 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NUBP1P53384 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
NUBP1P53384 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NUBP1P53384 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NUBP1P53384 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NUBP1P53384 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUBP1P53384 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NUBP1P53384 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUBP1P53384 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUBP1P53384 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUBP1P53384 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.84■□□□□ 0.29
NUBP1P53384 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUBP1P53384 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUBP1P53384 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.84■□□□□ 0.29
NUBP1P53384 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NUBP1P53384 MS4A6A-201ENST00000412309 1284 ntTSL 2 BASIC16.84■□□□□ 0.29
NUBP1P53384 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.84■□□□□ 0.29
NUBP1P53384 ANAPC10-202ENST00000451299 928 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUBP1P53384 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.84■□□□□ 0.29
NUBP1P53384 RN7SKP157-201ENST00000516174 282 ntBASIC16.84■□□□□ 0.29
NUBP1P53384 RN7SKP253-201ENST00000516424 309 ntBASIC16.84■□□□□ 0.29
NUBP1P53384 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.84■□□□□ 0.29
NUBP1P53384 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
NUBP1P53384 LINC00648-204ENST00000557749 443 ntTSL 5 BASIC16.84■□□□□ 0.29
NUBP1P53384 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NUBP1P53384 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.84■□□□□ 0.29
NUBP1P53384 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.84■□□□□ 0.29
NUBP1P53384 FP565260.4-201ENST00000624081 513 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NUBP1P53384 AP001350.2-201ENST00000625104 1094 ntBASIC16.84■□□□□ 0.29
NUBP1P53384 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.84■□□□□ 0.29
NUBP1P53384 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUBP1P53384 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.84■□□□□ 0.29
NUBP1P53384 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUBP1P53384 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NUBP1P53384 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUBP1P53384 AC016027.1-202ENST00000607927 1699 ntBASIC16.84■□□□□ 0.29
NUBP1P53384 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUBP1P53384 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUBP1P53384 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.84■□□□□ 0.29
NUBP1P53384 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUBP1P53384 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUBP1P53384 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
NUBP1P53384 AL049812.1-201ENST00000432563 2267 ntBASIC16.84■□□□□ 0.29
NUBP1P53384 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NUBP1P53384 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NUBP1P53384 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.83■□□□□ 0.28
NUBP1P53384 MGST3-204ENST00000367888 778 ntTSL 3 BASIC16.83■□□□□ 0.28
NUBP1P53384 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
NUBP1P53384 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
NUBP1P53384 ACP1-203ENST00000405233 1149 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NUBP1P53384 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NUBP1P53384 TUBB1P2-201ENST00000422712 1306 ntBASIC16.83■□□□□ 0.28
NUBP1P53384 KRT43P-201ENST00000434019 910 ntBASIC16.83■□□□□ 0.28
NUBP1P53384 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.83■□□□□ 0.28
NUBP1P53384 UBE2V2P4-201ENST00000447495 259 ntBASIC16.83■□□□□ 0.28
NUBP1P53384 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NUBP1P53384 TUBB1P1-201ENST00000503144 1300 ntBASIC16.83■□□□□ 0.28
NUBP1P53384 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC16.83■□□□□ 0.28
NUBP1P53384 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NUBP1P53384 AC109466.1-203ENST00000524297 1083 ntTSL 3 BASIC16.83■□□□□ 0.28
NUBP1P53384 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NUBP1P53384 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.83■□□□□ 0.28
NUBP1P53384 WASH4P-201ENST00000564273 1246 ntBASIC16.83■□□□□ 0.28
NUBP1P53384 AL138918.1-201ENST00000568306 659 ntBASIC16.83■□□□□ 0.28
NUBP1P53384 AC091167.2-201ENST00000579581 588 ntBASIC16.83■□□□□ 0.28
NUBP1P53384 RN7SL190P-201ENST00000582519 257 ntBASIC16.83■□□□□ 0.28
NUBP1P53384 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC16.83■□□□□ 0.28
NUBP1P53384 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.83■□□□□ 0.28
NUBP1P53384 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.83■□□□□ 0.28
NUBP1P53384 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NUBP1P53384 AC100814.1-201ENST00000606963 623 ntBASIC16.83■□□□□ 0.28
NUBP1P53384 RN7SL828P-201ENST00000607615 303 ntBASIC16.83■□□□□ 0.28
NUBP1P53384 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC16.83■□□□□ 0.28
NUBP1P53384 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC16.83■□□□□ 0.28
NUBP1P53384 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.83■□□□□ 0.28
NUBP1P53384 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NUBP1P53384 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NUBP1P53384 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NUBP1P53384 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.82■□□□□ 0.28
NUBP1P53384 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NUBP1P53384 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NUBP1P53384 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NUBP1P53384 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NUBP1P53384 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.82■□□□□ 0.28
NUBP1P53384 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms