Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.84■□□□□ 0.29
ZNF140P52738 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.84■□□□□ 0.29
ZNF140P52738 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ZNF140P52738 AC145285.3-201ENST00000564603 959 ntBASIC16.84■□□□□ 0.29
ZNF140P52738 Z83851.2-201ENST00000609564 659 ntBASIC16.84■□□□□ 0.29
ZNF140P52738 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.84■□□□□ 0.29
ZNF140P52738 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF140P52738 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF140P52738 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF140P52738 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF140P52738 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ZNF140P52738 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF140P52738 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.84■□□□□ 0.29
ZNF140P52738 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
ZNF140P52738 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.84■□□□□ 0.29
ZNF140P52738 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.84■□□□□ 0.29
ZNF140P52738 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF140P52738 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
ZNF140P52738 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.83■□□□□ 0.29
ZNF140P52738 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF140P52738 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ZNF140P52738 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.83■□□□□ 0.28
ZNF140P52738 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF140P52738 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF140P52738 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF140P52738 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ZNF140P52738 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
ZNF140P52738 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ZNF140P52738 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ZNF140P52738 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.83■□□□□ 0.28
ZNF140P52738 FAM185BP-201ENST00000443595 716 ntBASIC16.83■□□□□ 0.28
ZNF140P52738 HLA-J-202ENST00000469281 1241 ntBASIC16.83■□□□□ 0.28
ZNF140P52738 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.83■□□□□ 0.28
ZNF140P52738 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF140P52738 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.83■□□□□ 0.28
ZNF140P52738 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF140P52738 AC006538.1-201ENST00000567905 1585 ntBASIC16.83■□□□□ 0.28
ZNF140P52738 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.83■□□□□ 0.28
ZNF140P52738 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.83■□□□□ 0.28
ZNF140P52738 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ZNF140P52738 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.83■□□□□ 0.28
ZNF140P52738 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF140P52738 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.83■□□□□ 0.28
ZNF140P52738 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.83■□□□□ 0.28
ZNF140P52738 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ZNF140P52738 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF140P52738 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF140P52738 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF140P52738 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ZNF140P52738 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ZNF140P52738 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF140P52738 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF140P52738 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF140P52738 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF140P52738 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF140P52738 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF140P52738 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF140P52738 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF140P52738 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.82■□□□□ 0.28
ZNF140P52738 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF140P52738 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ZNF140P52738 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF140P52738 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF140P52738 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.82■□□□□ 0.28
ZNF140P52738 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF140P52738 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF140P52738 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF140P52738 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF140P52738 IL9RP2-201ENST00000423948 1312 ntBASIC16.82■□□□□ 0.28
ZNF140P52738 UBALD1-205ENST00000590891 2641 ntBASIC16.82■□□□□ 0.28
ZNF140P52738 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ZNF140P52738 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF140P52738 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF140P52738 AC026396.1-201ENST00000419388 421 ntBASIC16.82■□□□□ 0.28
ZNF140P52738 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF140P52738 HCG4B-203ENST00000450128 991 ntBASIC16.82■□□□□ 0.28
ZNF140P52738 AC079776.4-201ENST00000511039 504 ntBASIC16.82■□□□□ 0.28
ZNF140P52738 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.82■□□□□ 0.28
ZNF140P52738 CYP2A7P1-201ENST00000595391 815 ntBASIC16.82■□□□□ 0.28
ZNF140P52738 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF140P52738 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.82■□□□□ 0.28
ZNF140P52738 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.82■□□□□ 0.28
ZNF140P52738 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
ZNF140P52738 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.82■□□□□ 0.28
ZNF140P52738 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF140P52738 PCDHA14-201ENST00000506751 2298 ntBASIC16.82■□□□□ 0.28
ZNF140P52738 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ZNF140P52738 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF140P52738 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.82■□□□□ 0.28
ZNF140P52738 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ZNF140P52738 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF140P52738 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF140P52738 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF140P52738 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF140P52738 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF140P52738 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.81■□□□□ 0.28
ZNF140P52738 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.81■□□□□ 0.28
ZNF140P52738 AC104109.2-201ENST00000602919 1418 ntBASIC16.81■□□□□ 0.28
ZNF140P52738 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.81■□□□□ 0.28
ZNF140P52738 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms