Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CLCN4P51793 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN4P51793 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.75■□□□□ 0.43
CLCN4P51793 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN4P51793 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN4P51793 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN4P51793 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.75■□□□□ 0.43
CLCN4P51793 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN4P51793 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLCN4P51793 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCN4P51793 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.74■□□□□ 0.43
CLCN4P51793 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCN4P51793 AC016027.1-202ENST00000607927 1699 ntBASIC17.74■□□□□ 0.43
CLCN4P51793 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN4P51793 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN4P51793 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN4P51793 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN4P51793 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCN4P51793 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCN4P51793 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.74■□□□□ 0.43
CLCN4P51793 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCN4P51793 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN4P51793 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCN4P51793 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN4P51793 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN4P51793 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCN4P51793 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCN4P51793 AC092580.3-201ENST00000430932 139 ntBASIC17.74■□□□□ 0.43
CLCN4P51793 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.74■□□□□ 0.43
CLCN4P51793 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCN4P51793 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCN4P51793 AL512638.1-201ENST00000457493 794 ntBASIC17.74■□□□□ 0.43
CLCN4P51793 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN4P51793 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN4P51793 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN4P51793 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CLCN4P51793 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN4P51793 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN4P51793 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.74■□□□□ 0.43
CLCN4P51793 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CLCN4P51793 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN4P51793 AC063926.2-201ENST00000623766 1308 ntBASIC17.73■□□□□ 0.43
CLCN4P51793 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN4P51793 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.73■□□□□ 0.43
CLCN4P51793 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN4P51793 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CLCN4P51793 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN4P51793 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN4P51793 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CLCN4P51793 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN4P51793 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN4P51793 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN4P51793 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.73■□□□□ 0.43
CLCN4P51793 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN4P51793 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN4P51793 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.73■□□□□ 0.43
CLCN4P51793 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.73■□□□□ 0.43
CLCN4P51793 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN4P51793 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN4P51793 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.73■□□□□ 0.43
CLCN4P51793 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.73■□□□□ 0.43
CLCN4P51793 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.73■□□□□ 0.43
CLCN4P51793 LINC00896-202ENST00000609602 2128 ntBASIC17.73■□□□□ 0.43
CLCN4P51793 AC012645.4-201ENST00000610691 1061 ntBASIC17.73■□□□□ 0.43
CLCN4P51793 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN4P51793 AP001350.2-201ENST00000625104 1094 ntBASIC17.73■□□□□ 0.43
CLCN4P51793 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
CLCN4P51793 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CLCN4P51793 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN4P51793 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.73■□□□□ 0.43
CLCN4P51793 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.73■□□□□ 0.43
CLCN4P51793 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN4P51793 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN4P51793 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.73■□□□□ 0.43
CLCN4P51793 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.73■□□□□ 0.43
CLCN4P51793 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN4P51793 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CLCN4P51793 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CLCN4P51793 BCL2-203ENST00000589955 5011 ntBASIC17.72■□□□□ 0.43
CLCN4P51793 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN4P51793 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN4P51793 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN4P51793 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.72■□□□□ 0.43
CLCN4P51793 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
CLCN4P51793 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN4P51793 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN4P51793 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CLCN4P51793 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.72■□□□□ 0.43
CLCN4P51793 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.72■□□□□ 0.43
CLCN4P51793 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN4P51793 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.72■□□□□ 0.43
CLCN4P51793 AC005225.4-201ENST00000557330 545 ntBASIC17.72■□□□□ 0.43
CLCN4P51793 MIR4453-201ENST00000584019 89 ntBASIC17.72■□□□□ 0.43
CLCN4P51793 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.72■□□□□ 0.43
CLCN4P51793 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.72■□□□□ 0.43
CLCN4P51793 AC005332.8-201ENST00000622750 2735 ntBASIC17.72■□□□□ 0.43
CLCN4P51793 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN4P51793 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CLCN4P51793 AC131009.4-201ENST00000624048 1740 ntBASIC17.72■□□□□ 0.43
CLCN4P51793 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms