Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6CP51160 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PDE6CP51160 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6CP51160 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6CP51160 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6CP51160 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.34■□□□□ 0.53
PDE6CP51160 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6CP51160 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PDE6CP51160 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDE6CP51160 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.33■□□□□ 0.53
PDE6CP51160 AL139384.1-201ENST00000612143 3047 ntBASIC18.33■□□□□ 0.53
PDE6CP51160 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDE6CP51160 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDE6CP51160 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDE6CP51160 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PDE6CP51160 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
PDE6CP51160 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE6CP51160 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE6CP51160 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.33■□□□□ 0.52
PDE6CP51160 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE6CP51160 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE6CP51160 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDE6CP51160 AC092910.1-201ENST00000482027 1129 ntBASIC18.33■□□□□ 0.52
PDE6CP51160 IGHV3-22-201ENST00000520721 359 ntBASIC18.33■□□□□ 0.52
PDE6CP51160 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE6CP51160 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.33■□□□□ 0.52
PDE6CP51160 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.33■□□□□ 0.52
PDE6CP51160 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.33■□□□□ 0.52
PDE6CP51160 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.33■□□□□ 0.52
PDE6CP51160 AL589182.2-201ENST00000619332 1049 ntBASIC18.33■□□□□ 0.52
PDE6CP51160 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE6CP51160 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE6CP51160 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.33■□□□□ 0.52
PDE6CP51160 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE6CP51160 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
PDE6CP51160 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE6CP51160 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE6CP51160 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE6CP51160 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE6CP51160 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PDE6CP51160 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
PDE6CP51160 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.52
PDE6CP51160 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.33■□□□□ 0.52
PDE6CP51160 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
PDE6CP51160 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6CP51160 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6CP51160 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6CP51160 AC018695.7-201ENST00000624587 2492 ntBASIC18.32■□□□□ 0.52
PDE6CP51160 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
PDE6CP51160 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6CP51160 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6CP51160 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6CP51160 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6CP51160 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6CP51160 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6CP51160 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PDE6CP51160 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6CP51160 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.32■□□□□ 0.52
PDE6CP51160 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6CP51160 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.32■□□□□ 0.52
PDE6CP51160 AC098831.1-202ENST00000438821 336 ntBASIC18.32■□□□□ 0.52
PDE6CP51160 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.32■□□□□ 0.52
PDE6CP51160 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.32■□□□□ 0.52
PDE6CP51160 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.32■□□□□ 0.52
PDE6CP51160 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.32■□□□□ 0.52
PDE6CP51160 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
PDE6CP51160 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.32■□□□□ 0.52
PDE6CP51160 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.32■□□□□ 0.52
PDE6CP51160 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
PDE6CP51160 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6CP51160 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.32■□□□□ 0.52
PDE6CP51160 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6CP51160 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PDE6CP51160 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6CP51160 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6CP51160 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6CP51160 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE6CP51160 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6CP51160 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6CP51160 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6CP51160 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6CP51160 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6CP51160 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6CP51160 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6CP51160 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6CP51160 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6CP51160 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6CP51160 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PDE6CP51160 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDE6CP51160 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.31■□□□□ 0.52
PDE6CP51160 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PDE6CP51160 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.31■□□□□ 0.52
PDE6CP51160 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.31■□□□□ 0.52
PDE6CP51160 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.31■□□□□ 0.52
PDE6CP51160 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.31■□□□□ 0.52
PDE6CP51160 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.31■□□□□ 0.52
PDE6CP51160 AL591424.1-201ENST00000442569 1213 ntBASIC18.31■□□□□ 0.52
PDE6CP51160 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.31■□□□□ 0.52
PDE6CP51160 AL671883.3-201ENST00000603274 991 ntBASIC18.31■□□□□ 0.52
PDE6CP51160 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms