Protein–RNA interactions for Protein: P49765

VEGFB, Vascular endothelial growth factor B, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFBP49765 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.17■□□□□ 0.66
VEGFBP49765 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VEGFBP49765 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VEGFBP49765 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.17■□□□□ 0.66
VEGFBP49765 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.16■□□□□ 0.66
VEGFBP49765 AFG3L1P-217ENST00000557444 2447 ntBASIC19.16■□□□□ 0.66
VEGFBP49765 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
VEGFBP49765 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFBP49765 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFBP49765 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFBP49765 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFBP49765 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFBP49765 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.16■□□□□ 0.66
VEGFBP49765 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.16■□□□□ 0.66
VEGFBP49765 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
VEGFBP49765 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFBP49765 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFBP49765 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.16■□□□□ 0.66
VEGFBP49765 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
VEGFBP49765 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
VEGFBP49765 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
VEGFBP49765 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
VEGFBP49765 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
VEGFBP49765 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC19.16■□□□□ 0.66
VEGFBP49765 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFBP49765 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.16■□□□□ 0.66
VEGFBP49765 ABBA01031663.1-201ENST00000635630 790 ntBASIC19.16■□□□□ 0.66
VEGFBP49765 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFBP49765 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFBP49765 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC19.16■□□□□ 0.66
VEGFBP49765 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFBP49765 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.16■□□□□ 0.66
VEGFBP49765 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
VEGFBP49765 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VEGFBP49765 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VEGFBP49765 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
VEGFBP49765 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VEGFBP49765 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VEGFBP49765 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
VEGFBP49765 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VEGFBP49765 SPDYE17-201ENST00000412399 783 ntBASIC19.15■□□□□ 0.66
VEGFBP49765 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
VEGFBP49765 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.15■□□□□ 0.66
VEGFBP49765 ARTN-209ENST00000479128 471 ntTSL 3 BASIC19.15■□□□□ 0.66
VEGFBP49765 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC19.15■□□□□ 0.66
VEGFBP49765 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC19.15■□□□□ 0.66
VEGFBP49765 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VEGFBP49765 SPCS2P2-201ENST00000603270 608 ntBASIC19.15■□□□□ 0.66
VEGFBP49765 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC19.15■□□□□ 0.66
VEGFBP49765 CU634019.7-201ENST00000624153 1185 ntBASIC19.15■□□□□ 0.66
VEGFBP49765 FP236241.2-201ENST00000624906 1185 ntBASIC19.15■□□□□ 0.66
VEGFBP49765 AC128714.1-201ENST00000637035 887 ntBASIC19.15■□□□□ 0.66
VEGFBP49765 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.15■□□□□ 0.66
VEGFBP49765 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VEGFBP49765 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VEGFBP49765 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
VEGFBP49765 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VEGFBP49765 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.15■□□□□ 0.66
VEGFBP49765 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VEGFBP49765 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.14■□□□□ 0.66
VEGFBP49765 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.14■□□□□ 0.65
VEGFBP49765 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
VEGFBP49765 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC19.14■□□□□ 0.65
VEGFBP49765 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
VEGFBP49765 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.14■□□□□ 0.65
VEGFBP49765 MGST3-203ENST00000367885 680 ntTSL 2 BASIC19.14■□□□□ 0.65
VEGFBP49765 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VEGFBP49765 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.14■□□□□ 0.65
VEGFBP49765 RPS2P36-201ENST00000456516 831 ntBASIC19.14■□□□□ 0.65
VEGFBP49765 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC19.14■□□□□ 0.65
VEGFBP49765 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC19.14■□□□□ 0.65
VEGFBP49765 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC19.14■□□□□ 0.65
VEGFBP49765 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC19.14■□□□□ 0.65
VEGFBP49765 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC19.14■□□□□ 0.65
VEGFBP49765 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VEGFBP49765 MIR6069-201ENST00000620069 79 ntBASIC19.14■□□□□ 0.65
VEGFBP49765 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC19.14■□□□□ 0.65
VEGFBP49765 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VEGFBP49765 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VEGFBP49765 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC19.14■□□□□ 0.65
VEGFBP49765 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
VEGFBP49765 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.14■□□□□ 0.65
VEGFBP49765 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.14■□□□□ 0.65
VEGFBP49765 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
VEGFBP49765 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VEGFBP49765 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VEGFBP49765 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
VEGFBP49765 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
VEGFBP49765 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VEGFBP49765 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VEGFBP49765 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC19.13■□□□□ 0.65
VEGFBP49765 RPL28-203ENST00000428193 573 ntTSL 2 BASIC19.13■□□□□ 0.65
VEGFBP49765 AL162726.2-201ENST00000438986 1017 ntBASIC19.13■□□□□ 0.65
VEGFBP49765 EIF4HP1-201ENST00000453115 687 ntBASIC19.13■□□□□ 0.65
VEGFBP49765 HNRNPA1P13-201ENST00000510646 963 ntBASIC19.13■□□□□ 0.65
VEGFBP49765 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC19.13■□□□□ 0.65
VEGFBP49765 HNRNPUP1-201ENST00000554987 333 ntBASIC19.13■□□□□ 0.65
VEGFBP49765 RPL28-207ENST00000558815 616 ntTSL 2 BASIC19.13■□□□□ 0.65
VEGFBP49765 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC19.13■□□□□ 0.65
VEGFBP49765 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms