Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 AC005332.1-201ENST00000577698 1310 ntBASIC10.81□□□□□ -0.68
UBE2AP49459 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC10.81□□□□□ -0.68
UBE2AP49459 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2AP49459 MIR193BHG-211ENST00000641433 5365 ntBASIC10.8□□□□□ -0.68
UBE2AP49459 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
UBE2AP49459 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2AP49459 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC10.8□□□□□ -0.68
UBE2AP49459 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC10.8□□□□□ -0.68
UBE2AP49459 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2AP49459 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2AP49459 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC10.8□□□□□ -0.68
UBE2AP49459 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2AP49459 IER3-202ENST00000376377 1350 ntBASIC10.8□□□□□ -0.68
UBE2AP49459 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2AP49459 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
UBE2AP49459 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2AP49459 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2AP49459 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
UBE2AP49459 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2AP49459 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2AP49459 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2AP49459 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2AP49459 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2AP49459 AL031133.1-201ENST00000406807 723 ntBASIC10.8□□□□□ -0.68
UBE2AP49459 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC10.8□□□□□ -0.68
UBE2AP49459 TSSC2-201ENST00000450217 709 ntBASIC10.8□□□□□ -0.68
UBE2AP49459 RN7SL606P-201ENST00000472779 293 ntBASIC10.8□□□□□ -0.68
UBE2AP49459 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC10.8□□□□□ -0.68
UBE2AP49459 AC122714.2-201ENST00000502787 707 ntBASIC10.8□□□□□ -0.68
UBE2AP49459 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC10.8□□□□□ -0.68
UBE2AP49459 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC10.8□□□□□ -0.68
UBE2AP49459 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
UBE2AP49459 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
UBE2AP49459 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC10.8□□□□□ -0.68
UBE2AP49459 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2AP49459 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC10.8□□□□□ -0.68
UBE2AP49459 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2AP49459 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2AP49459 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
UBE2AP49459 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2AP49459 AL162727.3-201ENST00000635661 2787 ntBASIC10.8□□□□□ -0.68
UBE2AP49459 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2AP49459 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2AP49459 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC10.8□□□□□ -0.68
UBE2AP49459 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2AP49459 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2AP49459 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
UBE2AP49459 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
UBE2AP49459 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC10.8□□□□□ -0.68
UBE2AP49459 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC10.8□□□□□ -0.68
UBE2AP49459 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2AP49459 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2AP49459 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2AP49459 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2AP49459 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
UBE2AP49459 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2AP49459 NF2-208ENST00000403435 2568 ntTSL 5 BASIC10.79□□□□□ -0.68
UBE2AP49459 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
UBE2AP49459 AC046185.3-201ENST00000623228 1824 ntBASIC10.79□□□□□ -0.68
UBE2AP49459 AMT-250ENST00000637682 1823 ntTSL 5 BASIC10.79□□□□□ -0.68
UBE2AP49459 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2AP49459 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC10.79□□□□□ -0.68
UBE2AP49459 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2AP49459 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC10.79□□□□□ -0.68
UBE2AP49459 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2AP49459 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC10.79□□□□□ -0.68
UBE2AP49459 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC10.79□□□□□ -0.68
UBE2AP49459 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2AP49459 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
UBE2AP49459 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC10.79□□□□□ -0.68
UBE2AP49459 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2AP49459 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC10.79□□□□□ -0.68
UBE2AP49459 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2AP49459 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC10.79□□□□□ -0.68
UBE2AP49459 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2AP49459 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2AP49459 AC125634.1-201ENST00000438758 1403 ntBASIC10.79□□□□□ -0.68
UBE2AP49459 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC10.79□□□□□ -0.68
UBE2AP49459 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2AP49459 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2AP49459 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC10.79□□□□□ -0.68
UBE2AP49459 FXN-203ENST00000396366 922 ntTSL 2 BASIC10.79□□□□□ -0.68
UBE2AP49459 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
UBE2AP49459 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC10.79□□□□□ -0.68
UBE2AP49459 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2AP49459 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2AP49459 PCED1CP-201ENST00000419887 785 ntBASIC10.79□□□□□ -0.68
UBE2AP49459 LINC00265-3P-201ENST00000447588 903 ntBASIC10.79□□□□□ -0.68
UBE2AP49459 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC10.79□□□□□ -0.68
UBE2AP49459 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2AP49459 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC10.79□□□□□ -0.68
UBE2AP49459 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC10.79□□□□□ -0.68
UBE2AP49459 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
UBE2AP49459 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC10.79□□□□□ -0.68
UBE2AP49459 TK1-204ENST00000590430 683 ntTSL 3 BASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms