Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PCP4P48539 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
PCP4P48539 PEG13-201ENST00000631594 5667 ntBASIC11.49□□□□□ -0.57
PCP4P48539 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
PCP4P48539 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
PCP4P48539 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC11.49□□□□□ -0.57
PCP4P48539 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PCP4P48539 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
PCP4P48539 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
PCP4P48539 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
PCP4P48539 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC11.49□□□□□ -0.57
PCP4P48539 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PCP4P48539 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC11.49□□□□□ -0.57
PCP4P48539 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
PCP4P48539 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC11.49□□□□□ -0.57
PCP4P48539 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
PCP4P48539 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
PCP4P48539 SMPD5-203ENST00000639008 1464 ntBASIC11.49□□□□□ -0.57
PCP4P48539 CCNG1-201ENST00000340828 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PCP4P48539 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
PCP4P48539 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
PCP4P48539 AL022069.1-201ENST00000568025 1636 ntBASIC11.49□□□□□ -0.57
PCP4P48539 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
PCP4P48539 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PCP4P48539 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PCP4P48539 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
PCP4P48539 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
PCP4P48539 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PCP4P48539 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
PCP4P48539 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC11.49□□□□□ -0.57
PCP4P48539 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PCP4P48539 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
PCP4P48539 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
PCP4P48539 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC11.48□□□□□ -0.57
PCP4P48539 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PCP4P48539 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC11.48□□□□□ -0.57
PCP4P48539 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PCP4P48539 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PCP4P48539 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC11.48□□□□□ -0.57
PCP4P48539 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PCP4P48539 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.48□□□□□ -0.57
PCP4P48539 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PCP4P48539 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC11.48□□□□□ -0.57
PCP4P48539 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
PCP4P48539 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PCP4P48539 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
PCP4P48539 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PCP4P48539 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PCP4P48539 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PCP4P48539 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
PCP4P48539 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PCP4P48539 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC11.48□□□□□ -0.57
PCP4P48539 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PCP4P48539 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PCP4P48539 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
PCP4P48539 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
PCP4P48539 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PCP4P48539 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PCP4P48539 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC11.48□□□□□ -0.57
PCP4P48539 AC104417.2-201ENST00000562989 1793 ntBASIC11.48□□□□□ -0.57
PCP4P48539 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC11.48□□□□□ -0.57
PCP4P48539 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
PCP4P48539 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PCP4P48539 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PCP4P48539 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC11.48□□□□□ -0.57
PCP4P48539 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
PCP4P48539 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PCP4P48539 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
PCP4P48539 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
PCP4P48539 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PCP4P48539 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC11.47□□□□□ -0.57
PCP4P48539 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PCP4P48539 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
PCP4P48539 CADM3-202ENST00000368125 3745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
PCP4P48539 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
PCP4P48539 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC11.47□□□□□ -0.57
PCP4P48539 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PCP4P48539 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PCP4P48539 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PCP4P48539 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
PCP4P48539 FER1L6-AS1-201ENST00000518567 2315 ntTSL 2 BASIC11.47□□□□□ -0.57
PCP4P48539 LINC00668-204ENST00000580197 2343 ntTSL 2 BASIC11.47□□□□□ -0.57
PCP4P48539 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PCP4P48539 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PCP4P48539 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PCP4P48539 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
PCP4P48539 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC11.47□□□□□ -0.57
PCP4P48539 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PCP4P48539 COBL-210ENST00000632460 1941 ntTSL 5 BASIC11.47□□□□□ -0.57
PCP4P48539 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PCP4P48539 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
PCP4P48539 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PCP4P48539 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC11.47□□□□□ -0.57
PCP4P48539 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC11.47□□□□□ -0.57
PCP4P48539 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PCP4P48539 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
PCP4P48539 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
PCP4P48539 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PCP4P48539 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
PCP4P48539 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms