Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 MIR4492-201ENST00000581627 80 ntBASIC21.1■□□□□ 0.97
RFC4P35249 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC21.1■□□□□ 0.97
RFC4P35249 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC21.1■□□□□ 0.97
RFC4P35249 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC21.1■□□□□ 0.97
RFC4P35249 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RFC4P35249 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RFC4P35249 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RFC4P35249 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFC4P35249 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
RFC4P35249 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFC4P35249 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC21.1■□□□□ 0.97
RFC4P35249 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFC4P35249 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RFC4P35249 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC4P35249 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RFC4P35249 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RFC4P35249 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC4P35249 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.09■□□□□ 0.97
RFC4P35249 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC4P35249 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC4P35249 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC21.09■□□□□ 0.97
RFC4P35249 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC21.09■□□□□ 0.97
RFC4P35249 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RFC4P35249 GNAQP1-201ENST00000444815 1067 ntBASIC21.09■□□□□ 0.97
RFC4P35249 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC21.09■□□□□ 0.97
RFC4P35249 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC21.09■□□□□ 0.97
RFC4P35249 INE1-201ENST00000456273 945 ntBASIC21.09■□□□□ 0.97
RFC4P35249 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RFC4P35249 AC135586.1-201ENST00000539323 574 ntBASIC21.09■□□□□ 0.97
RFC4P35249 SPTSSB-204ENST00000617024 1292 ntBASIC21.09■□□□□ 0.97
RFC4P35249 MIR6799-201ENST00000620297 69 ntBASIC21.09■□□□□ 0.97
RFC4P35249 IGHV3-72-202ENST00000621503 303 ntBASIC21.09■□□□□ 0.97
RFC4P35249 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
RFC4P35249 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.09■□□□□ 0.97
RFC4P35249 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC4P35249 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC4P35249 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC4P35249 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC4P35249 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC4P35249 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC4P35249 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC4P35249 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RFC4P35249 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC4P35249 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC4P35249 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC21.09■□□□□ 0.97
RFC4P35249 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RFC4P35249 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFC4P35249 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RFC4P35249 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RFC4P35249 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
RFC4P35249 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFC4P35249 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFC4P35249 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFC4P35249 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC21.08■□□□□ 0.97
RFC4P35249 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC21.08■□□□□ 0.97
RFC4P35249 FAM220BP-201ENST00000377689 816 ntBASIC21.08■□□□□ 0.97
RFC4P35249 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RFC4P35249 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFC4P35249 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.97
RFC4P35249 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFC4P35249 PGF-202ENST00000405431 666 ntTSL 5 BASIC21.08■□□□□ 0.97
RFC4P35249 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
RFC4P35249 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC21.08■□□□□ 0.97
RFC4P35249 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
RFC4P35249 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RFC4P35249 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RFC4P35249 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RFC4P35249 AC017083.2-201ENST00000608069 979 ntBASIC21.08■□□□□ 0.97
RFC4P35249 AC093525.9-201ENST00000624961 1746 ntBASIC21.08■□□□□ 0.97
RFC4P35249 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.08■□□□□ 0.96
RFC4P35249 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC21.08■□□□□ 0.96
RFC4P35249 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
RFC4P35249 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RFC4P35249 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
RFC4P35249 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RFC4P35249 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFC4P35249 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.07■□□□□ 0.96
RFC4P35249 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RFC4P35249 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFC4P35249 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RFC4P35249 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFC4P35249 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.07■□□□□ 0.96
RFC4P35249 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFC4P35249 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
RFC4P35249 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RFC4P35249 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFC4P35249 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC21.07■□□□□ 0.96
RFC4P35249 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
RFC4P35249 CENPM-206ENST00000407253 818 ntTSL 2 BASIC21.07■□□□□ 0.96
RFC4P35249 AP006294.1-201ENST00000415407 339 ntBASIC21.07■□□□□ 0.96
RFC4P35249 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC21.07■□□□□ 0.96
RFC4P35249 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC21.07■□□□□ 0.96
RFC4P35249 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC21.07■□□□□ 0.96
RFC4P35249 RN7SL752P-201ENST00000463779 287 ntBASIC21.07■□□□□ 0.96
RFC4P35249 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC21.07■□□□□ 0.96
RFC4P35249 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC21.07■□□□□ 0.96
RFC4P35249 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC21.07■□□□□ 0.96
RFC4P35249 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RFC4P35249 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC21.07■□□□□ 0.96
RFC4P35249 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms