Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.95■□□□□ 0.46
CTNNA1P35221 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.95■□□□□ 0.46
CTNNA1P35221 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.95■□□□□ 0.46
CTNNA1P35221 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.95■□□□□ 0.46
CTNNA1P35221 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTNNA1P35221 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CTNNA1P35221 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTNNA1P35221 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTNNA1P35221 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
CTNNA1P35221 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTNNA1P35221 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CTNNA1P35221 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTNNA1P35221 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.95■□□□□ 0.46
CTNNA1P35221 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
CTNNA1P35221 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CTNNA1P35221 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.94■□□□□ 0.46
CTNNA1P35221 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTNNA1P35221 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
CTNNA1P35221 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
CTNNA1P35221 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
CTNNA1P35221 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.94■□□□□ 0.46
CTNNA1P35221 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTNNA1P35221 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTNNA1P35221 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.94■□□□□ 0.46
CTNNA1P35221 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.94■□□□□ 0.46
CTNNA1P35221 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.94■□□□□ 0.46
CTNNA1P35221 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTNNA1P35221 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTNNA1P35221 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
CTNNA1P35221 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTNNA1P35221 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
CTNNA1P35221 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CTNNA1P35221 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTNNA1P35221 RCN1P2-201ENST00000398357 915 ntBASIC17.94■□□□□ 0.46
CTNNA1P35221 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTNNA1P35221 IGHV3-47-201ENST00000425060 335 ntBASIC17.94■□□□□ 0.46
CTNNA1P35221 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTNNA1P35221 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.94■□□□□ 0.46
CTNNA1P35221 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTNNA1P35221 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CTNNA1P35221 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTNNA1P35221 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CTNNA1P35221 AP002414.4-201ENST00000589764 1148 ntBASIC17.94■□□□□ 0.46
CTNNA1P35221 AP000867.4-201ENST00000641616 219 ntBASIC17.94■□□□□ 0.46
CTNNA1P35221 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTNNA1P35221 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTNNA1P35221 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTNNA1P35221 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTNNA1P35221 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.94■□□□□ 0.46
CTNNA1P35221 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTNNA1P35221 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTNNA1P35221 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTNNA1P35221 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.94■□□□□ 0.46
CTNNA1P35221 TUBB8P12-201ENST00000308911 1335 ntBASIC17.94■□□□□ 0.46
CTNNA1P35221 TUBB7P-202ENST00000428444 1305 ntBASIC17.94■□□□□ 0.46
CTNNA1P35221 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.94■□□□□ 0.46
CTNNA1P35221 TUBB8P7-204ENST00000567960 1332 ntBASIC17.94■□□□□ 0.46
CTNNA1P35221 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTNNA1P35221 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CTNNA1P35221 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTNNA1P35221 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTNNA1P35221 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.94■□□□□ 0.46
CTNNA1P35221 AL662844.4-201ENST00000606367 2838 ntBASIC17.94■□□□□ 0.46
CTNNA1P35221 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
CTNNA1P35221 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNNA1P35221 AL645728.1-201ENST00000366221 2101 ntBASIC17.93■□□□□ 0.46
CTNNA1P35221 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.93■□□□□ 0.46
CTNNA1P35221 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNNA1P35221 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CTNNA1P35221 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNNA1P35221 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNNA1P35221 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNNA1P35221 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNNA1P35221 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CTNNA1P35221 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CTNNA1P35221 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.93■□□□□ 0.46
CTNNA1P35221 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTNNA1P35221 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
CTNNA1P35221 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CTNNA1P35221 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CTNNA1P35221 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CTNNA1P35221 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTNNA1P35221 AP002490.2-201ENST00000524791 560 ntBASIC17.93■□□□□ 0.46
CTNNA1P35221 DUX4L17-201ENST00000557360 1267 ntBASIC17.93■□□□□ 0.46
CTNNA1P35221 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
CTNNA1P35221 AC114341.1-201ENST00000618070 349 ntBASIC17.93■□□□□ 0.46
CTNNA1P35221 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNNA1P35221 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CTNNA1P35221 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CTNNA1P35221 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNNA1P35221 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNNA1P35221 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNNA1P35221 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CTNNA1P35221 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CTNNA1P35221 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.93■□□□□ 0.46
CTNNA1P35221 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CTNNA1P35221 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CTNNA1P35221 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTNNA1P35221 AC132872.4-202ENST00000622924 2756 ntBASIC17.92■□□□□ 0.46
CTNNA1P35221 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms