Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CPS1P31327 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC23.56■■□□□ 1.36
CPS1P31327 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
CPS1P31327 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CPS1P31327 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC23.56■■□□□ 1.36
CPS1P31327 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CPS1P31327 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC23.56■■□□□ 1.36
CPS1P31327 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CPS1P31327 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC23.56■■□□□ 1.36
CPS1P31327 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC23.56■■□□□ 1.36
CPS1P31327 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC23.56■■□□□ 1.36
CPS1P31327 AC123567.1-201ENST00000548294 1261 ntBASIC23.56■■□□□ 1.36
CPS1P31327 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CPS1P31327 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC23.56■■□□□ 1.36
CPS1P31327 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CPS1P31327 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CPS1P31327 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC23.55■■□□□ 1.36
CPS1P31327 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CPS1P31327 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC23.55■■□□□ 1.36
CPS1P31327 FOS-208ENST00000555686 1496 ntTSL 2 BASIC23.55■■□□□ 1.36
CPS1P31327 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC23.55■■□□□ 1.36
CPS1P31327 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CPS1P31327 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CPS1P31327 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
CPS1P31327 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC23.55■■□□□ 1.36
CPS1P31327 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CPS1P31327 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CPS1P31327 AGER-214ENST00000538695 487 ntTSL 2 BASIC23.55■■□□□ 1.36
CPS1P31327 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC23.55■■□□□ 1.36
CPS1P31327 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC23.55■■□□□ 1.36
CPS1P31327 CYP2A7P1-201ENST00000595391 815 ntBASIC23.55■■□□□ 1.36
CPS1P31327 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CPS1P31327 PPA1-206ENST00000625364 644 ntTSL 5 BASIC23.55■■□□□ 1.36
CPS1P31327 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
CPS1P31327 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.55■■□□□ 1.36
CPS1P31327 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC23.55■■□□□ 1.36
CPS1P31327 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC23.55■■□□□ 1.36
CPS1P31327 AC012317.2-201ENST00000623305 2251 ntBASIC23.55■■□□□ 1.36
CPS1P31327 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC23.55■■□□□ 1.36
CPS1P31327 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CPS1P31327 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
CPS1P31327 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC23.55■■□□□ 1.36
CPS1P31327 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CPS1P31327 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CPS1P31327 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CPS1P31327 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC23.54■■□□□ 1.36
CPS1P31327 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CPS1P31327 AC108725.1-201ENST00000495472 409 ntBASIC23.54■■□□□ 1.36
CPS1P31327 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC23.54■■□□□ 1.36
CPS1P31327 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
CPS1P31327 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC23.54■■□□□ 1.36
CPS1P31327 MIR4492-201ENST00000581627 80 ntBASIC23.54■■□□□ 1.36
CPS1P31327 WFDC1-204ENST00000613603 549 ntBASIC23.54■■□□□ 1.36
CPS1P31327 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC23.54■■□□□ 1.36
CPS1P31327 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC23.54■■□□□ 1.36
CPS1P31327 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CPS1P31327 AC116353.5-201ENST00000638148 1699 ntBASIC23.54■■□□□ 1.36
CPS1P31327 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CPS1P31327 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CPS1P31327 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CPS1P31327 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CPS1P31327 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC23.54■■□□□ 1.36
CPS1P31327 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CPS1P31327 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC23.54■■□□□ 1.36
CPS1P31327 MIR1247-201ENST00000408206 136 ntBASIC23.54■■□□□ 1.36
CPS1P31327 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CPS1P31327 CDK2AP2P3-201ENST00000422476 372 ntBASIC23.54■■□□□ 1.36
CPS1P31327 KRT43P-201ENST00000434019 910 ntBASIC23.54■■□□□ 1.36
CPS1P31327 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC23.54■■□□□ 1.36
CPS1P31327 RAB35-202ENST00000534951 939 ntTSL 2 BASIC23.54■■□□□ 1.36
CPS1P31327 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CPS1P31327 5S_rRNA.22-201ENST00000614916 106 ntBASIC23.54■■□□□ 1.36
CPS1P31327 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC23.54■■□□□ 1.36
CPS1P31327 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC23.54■■□□□ 1.36
CPS1P31327 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CPS1P31327 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CPS1P31327 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC23.53■■□□□ 1.36
CPS1P31327 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
CPS1P31327 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CPS1P31327 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CPS1P31327 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CPS1P31327 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CPS1P31327 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
CPS1P31327 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC23.53■■□□□ 1.36
CPS1P31327 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
CPS1P31327 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CPS1P31327 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC23.53■■□□□ 1.36
CPS1P31327 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CPS1P31327 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
CPS1P31327 BRWD1P1-201ENST00000401091 371 ntBASIC23.53■■□□□ 1.36
CPS1P31327 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CPS1P31327 TPRX2P-201ENST00000535362 881 ntBASIC23.53■■□□□ 1.36
CPS1P31327 AC105021.1-202ENST00000570572 669 ntBASIC23.53■■□□□ 1.36
CPS1P31327 SRD5A3P1-201ENST00000603021 949 ntBASIC23.53■■□□□ 1.36
CPS1P31327 AC093726.1-201ENST00000608064 963 ntBASIC23.53■■□□□ 1.36
CPS1P31327 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC23.53■■□□□ 1.36
CPS1P31327 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CPS1P31327 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC23.52■■□□□ 1.36
CPS1P31327 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CPS1P31327 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms