Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC20.4■□□□□ 0.86
CHMLP26374 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHMLP26374 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.4■□□□□ 0.86
CHMLP26374 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.4■□□□□ 0.86
CHMLP26374 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHMLP26374 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHMLP26374 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.4■□□□□ 0.86
CHMLP26374 AP002469.2-201ENST00000531724 424 ntBASIC20.4■□□□□ 0.86
CHMLP26374 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CHMLP26374 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.4■□□□□ 0.86
CHMLP26374 AL671710.1-201ENST00000610245 2349 ntBASIC20.4■□□□□ 0.86
CHMLP26374 GGTLC5P-201ENST00000617623 998 ntBASIC20.4■□□□□ 0.86
CHMLP26374 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.4■□□□□ 0.86
CHMLP26374 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.4■□□□□ 0.86
CHMLP26374 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHMLP26374 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.4■□□□□ 0.86
CHMLP26374 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHMLP26374 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHMLP26374 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC20.39■□□□□ 0.86
CHMLP26374 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20.39■□□□□ 0.86
CHMLP26374 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHMLP26374 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHMLP26374 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CHMLP26374 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.39■□□□□ 0.86
CHMLP26374 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.39■□□□□ 0.86
CHMLP26374 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMLP26374 AL662844.4-201ENST00000606367 2838 ntBASIC20.39■□□□□ 0.85
CHMLP26374 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMLP26374 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.39■□□□□ 0.85
CHMLP26374 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHMLP26374 FAAHP1-202ENST00000446499 1238 ntBASIC20.39■□□□□ 0.85
CHMLP26374 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.39■□□□□ 0.85
CHMLP26374 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.39■□□□□ 0.85
CHMLP26374 RNA5SP419-201ENST00000515908 135 ntBASIC20.39■□□□□ 0.85
CHMLP26374 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.39■□□□□ 0.85
CHMLP26374 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.39■□□□□ 0.85
CHMLP26374 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.39■□□□□ 0.85
CHMLP26374 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.39■□□□□ 0.85
CHMLP26374 OR7E47P-204ENST00000575924 449 ntBASIC20.39■□□□□ 0.85
CHMLP26374 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.39■□□□□ 0.85
CHMLP26374 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.39■□□□□ 0.85
CHMLP26374 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHMLP26374 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMLP26374 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMLP26374 OR6D1P-202ENST00000641007 5290 ntBASIC20.39■□□□□ 0.85
CHMLP26374 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHMLP26374 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CHMLP26374 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHMLP26374 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHMLP26374 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMLP26374 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CHMLP26374 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
CHMLP26374 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHMLP26374 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHMLP26374 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMLP26374 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMLP26374 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMLP26374 AC006449.5-201ENST00000610658 2098 ntBASIC20.38■□□□□ 0.85
CHMLP26374 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMLP26374 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CHMLP26374 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHMLP26374 AC079328.2-201ENST00000561241 3354 ntBASIC20.38■□□□□ 0.85
CHMLP26374 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMLP26374 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMLP26374 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMLP26374 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.38■□□□□ 0.85
CHMLP26374 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.38■□□□□ 0.85
CHMLP26374 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CHMLP26374 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.38■□□□□ 0.85
CHMLP26374 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.38■□□□□ 0.85
CHMLP26374 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMLP26374 AL160237.2-201ENST00000556165 472 ntBASIC20.38■□□□□ 0.85
CHMLP26374 MIR7706-201ENST00000613747 67 ntBASIC20.38■□□□□ 0.85
CHMLP26374 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.38■□□□□ 0.85
CHMLP26374 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.38■□□□□ 0.85
CHMLP26374 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHMLP26374 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CHMLP26374 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMLP26374 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CHMLP26374 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMLP26374 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC20.38■□□□□ 0.85
CHMLP26374 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMLP26374 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMLP26374 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMLP26374 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHMLP26374 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC20.38■□□□□ 0.85
CHMLP26374 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHMLP26374 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHMLP26374 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMLP26374 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.37■□□□□ 0.85
CHMLP26374 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMLP26374 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CHMLP26374 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.37■□□□□ 0.85
CHMLP26374 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMLP26374 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMLP26374 AC131009.4-201ENST00000624048 1740 ntBASIC20.37■□□□□ 0.85
CHMLP26374 AL512652.2-201ENST00000625156 1716 ntBASIC20.37■□□□□ 0.85
CHMLP26374 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMLP26374 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMLP26374 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms