Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.99□□□□□ -0.17
CCL3L1P16619 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.99□□□□□ -0.17
CCL3L1P16619 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.99□□□□□ -0.17
CCL3L1P16619 BX640515.1-201ENST00000617215 977 ntBASIC13.99□□□□□ -0.17
CCL3L1P16619 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL3L1P16619 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL3L1P16619 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL3L1P16619 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL3L1P16619 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL3L1P16619 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL3L1P16619 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL3L1P16619 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL3L1P16619 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL3L1P16619 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL3L1P16619 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL3L1P16619 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL3L1P16619 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.99□□□□□ -0.17
CCL3L1P16619 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL3L1P16619 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CCL3L1P16619 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL3L1P16619 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL3L1P16619 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL3L1P16619 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
CCL3L1P16619 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.98□□□□□ -0.17
CCL3L1P16619 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CCL3L1P16619 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 AL021920.2-201ENST00000624828 1351 ntBASIC13.98□□□□□ -0.17
CCL3L1P16619 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CCL3L1P16619 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 AC106886.4-201ENST00000623557 2502 ntBASIC13.98□□□□□ -0.17
CCL3L1P16619 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.98□□□□□ -0.17
CCL3L1P16619 AL121761.2-201ENST00000598007 1648 ntBASIC13.98□□□□□ -0.17
CCL3L1P16619 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CCL3L1P16619 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.98□□□□□ -0.17
CCL3L1P16619 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CCL3L1P16619 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CCL3L1P16619 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CCL3L1P16619 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.98□□□□□ -0.17
CCL3L1P16619 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.98□□□□□ -0.17
CCL3L1P16619 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.98□□□□□ -0.17
CCL3L1P16619 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.98□□□□□ -0.17
CCL3L1P16619 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 OR7E47P-204ENST00000575924 449 ntBASIC13.98□□□□□ -0.17
CCL3L1P16619 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.98□□□□□ -0.17
CCL3L1P16619 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.98□□□□□ -0.17
CCL3L1P16619 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.98□□□□□ -0.17
CCL3L1P16619 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC13.98□□□□□ -0.17
CCL3L1P16619 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.98□□□□□ -0.17
CCL3L1P16619 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.98□□□□□ -0.17
CCL3L1P16619 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL3L1P16619 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL3L1P16619 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC13.97□□□□□ -0.17
CCL3L1P16619 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL3L1P16619 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL3L1P16619 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.97□□□□□ -0.17
CCL3L1P16619 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CCL3L1P16619 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL3L1P16619 TUBB8P12-201ENST00000308911 1335 ntBASIC13.97□□□□□ -0.17
CCL3L1P16619 TUBB7P-202ENST00000428444 1305 ntBASIC13.97□□□□□ -0.17
CCL3L1P16619 TUBB8P7-204ENST00000567960 1332 ntBASIC13.97□□□□□ -0.17
CCL3L1P16619 AC020916.1-201ENST00000587762 1774 ntBASIC13.97□□□□□ -0.17
CCL3L1P16619 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL3L1P16619 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL3L1P16619 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL3L1P16619 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CCL3L1P16619 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL3L1P16619 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.97□□□□□ -0.17
CCL3L1P16619 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
CCL3L1P16619 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.97□□□□□ -0.17
CCL3L1P16619 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.97□□□□□ -0.17
CCL3L1P16619 AC034105.1-201ENST00000563488 319 ntBASIC13.97□□□□□ -0.17
CCL3L1P16619 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.97□□□□□ -0.17
CCL3L1P16619 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.97□□□□□ -0.17
CCL3L1P16619 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms