Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 LAGE3P1-201ENST00000425356 484 ntBASIC16.56■□□□□ 0.24
CDH1P12830 KRT18P67-201ENST00000432816 1264 ntBASIC16.56■□□□□ 0.24
CDH1P12830 TPM4P1-201ENST00000436100 807 ntBASIC16.56■□□□□ 0.24
CDH1P12830 AF186996.4-201ENST00000467186 377 ntBASIC16.56■□□□□ 0.24
CDH1P12830 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH1P12830 OR7E14P-202ENST00000530490 1290 ntBASIC16.56■□□□□ 0.24
CDH1P12830 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH1P12830 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH1P12830 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.56■□□□□ 0.24
CDH1P12830 AC104692.2-201ENST00000603054 253 ntBASIC16.56■□□□□ 0.24
CDH1P12830 AC107918.4-202ENST00000641623 219 ntBASIC16.56■□□□□ 0.24
CDH1P12830 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH1P12830 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH1P12830 AC005915.1-201ENST00000624912 2018 ntBASIC16.56■□□□□ 0.24
CDH1P12830 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH1P12830 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH1P12830 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH1P12830 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH1P12830 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH1P12830 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH1P12830 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH1P12830 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH1P12830 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH1P12830 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH1P12830 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH1P12830 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CDH1P12830 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH1P12830 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH1P12830 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CDH1P12830 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH1P12830 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH1P12830 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH1P12830 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH1P12830 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
CDH1P12830 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH1P12830 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH1P12830 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CDH1P12830 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH1P12830 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH1P12830 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.55■□□□□ 0.24
CDH1P12830 AC018712.1-201ENST00000455767 687 ntBASIC16.55■□□□□ 0.24
CDH1P12830 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.55■□□□□ 0.24
CDH1P12830 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CDH1P12830 AP002469.2-201ENST00000531724 424 ntBASIC16.55■□□□□ 0.24
CDH1P12830 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.55■□□□□ 0.24
CDH1P12830 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH1P12830 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.55■□□□□ 0.24
CDH1P12830 AC004706.3-202ENST00000621574 984 ntBASIC16.55■□□□□ 0.24
CDH1P12830 AC148477.8-201ENST00000624298 468 ntBASIC16.55■□□□□ 0.24
CDH1P12830 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH1P12830 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CDH1P12830 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH1P12830 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH1P12830 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
CDH1P12830 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH1P12830 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CDH1P12830 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH1P12830 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH1P12830 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH1P12830 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH1P12830 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH1P12830 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CDH1P12830 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH1P12830 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CDH1P12830 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH1P12830 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH1P12830 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH1P12830 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CDH1P12830 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH1P12830 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH1P12830 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH1P12830 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH1P12830 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
CDH1P12830 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
CDH1P12830 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH1P12830 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CDH1P12830 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH1P12830 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.54■□□□□ 0.24
CDH1P12830 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH1P12830 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CDH1P12830 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH1P12830 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH1P12830 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.54■□□□□ 0.24
CDH1P12830 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.54■□□□□ 0.24
CDH1P12830 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.54■□□□□ 0.24
CDH1P12830 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH1P12830 ELK2BP-201ENST00000415014 1224 ntBASIC16.54■□□□□ 0.24
CDH1P12830 HNRNPDP1-201ENST00000439535 754 ntBASIC16.54■□□□□ 0.24
CDH1P12830 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.54■□□□□ 0.24
CDH1P12830 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.54■□□□□ 0.24
CDH1P12830 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.54■□□□□ 0.24
CDH1P12830 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.54■□□□□ 0.24
CDH1P12830 AL160237.2-201ENST00000556165 472 ntBASIC16.54■□□□□ 0.24
CDH1P12830 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.54■□□□□ 0.24
CDH1P12830 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.54■□□□□ 0.24
CDH1P12830 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH1P12830 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH1P12830 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH1P12830 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH1P12830 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms