Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.46■□□□□ 0.71
BMP3P12645 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.46■□□□□ 0.71
BMP3P12645 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.46■□□□□ 0.71
BMP3P12645 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.46■□□□□ 0.71
BMP3P12645 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.46■□□□□ 0.71
BMP3P12645 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.46■□□□□ 0.71
BMP3P12645 AC025678.2-201ENST00000562061 970 ntBASIC19.46■□□□□ 0.71
BMP3P12645 LINC01225-203ENST00000563550 1244 ntBASIC19.46■□□□□ 0.71
BMP3P12645 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.46■□□□□ 0.71
BMP3P12645 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
BMP3P12645 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.46■□□□□ 0.71
BMP3P12645 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.46■□□□□ 0.71
BMP3P12645 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.46■□□□□ 0.71
BMP3P12645 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.46■□□□□ 0.71
BMP3P12645 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.46■□□□□ 0.71
BMP3P12645 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
BMP3P12645 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.46■□□□□ 0.71
BMP3P12645 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
BMP3P12645 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
BMP3P12645 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BMP3P12645 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.46■□□□□ 0.71
BMP3P12645 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BMP3P12645 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.46■□□□□ 0.71
BMP3P12645 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BMP3P12645 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BMP3P12645 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BMP3P12645 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
BMP3P12645 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.45■□□□□ 0.7
BMP3P12645 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
BMP3P12645 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BMP3P12645 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.45■□□□□ 0.7
BMP3P12645 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BMP3P12645 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BMP3P12645 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BMP3P12645 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
BMP3P12645 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BMP3P12645 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BMP3P12645 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BMP3P12645 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BMP3P12645 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
BMP3P12645 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BMP3P12645 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.45■□□□□ 0.7
BMP3P12645 KRT18P32-201ENST00000424695 1287 ntBASIC19.45■□□□□ 0.7
BMP3P12645 FAM58DP-201ENST00000428076 619 ntBASIC19.45■□□□□ 0.7
BMP3P12645 IGHV3-62-201ENST00000520057 340 ntBASIC19.45■□□□□ 0.7
BMP3P12645 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
BMP3P12645 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.45■□□□□ 0.7
BMP3P12645 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.45■□□□□ 0.7
BMP3P12645 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
BMP3P12645 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BMP3P12645 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BMP3P12645 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
BMP3P12645 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.45■□□□□ 0.7
BMP3P12645 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
BMP3P12645 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BMP3P12645 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BMP3P12645 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
BMP3P12645 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BMP3P12645 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BMP3P12645 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BMP3P12645 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.44■□□□□ 0.7
BMP3P12645 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BMP3P12645 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BMP3P12645 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
BMP3P12645 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BMP3P12645 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BMP3P12645 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BMP3P12645 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.44■□□□□ 0.7
BMP3P12645 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BMP3P12645 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BMP3P12645 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
BMP3P12645 AC016027.1-202ENST00000607927 1699 ntBASIC19.44■□□□□ 0.7
BMP3P12645 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.44■□□□□ 0.7
BMP3P12645 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.44■□□□□ 0.7
BMP3P12645 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BMP3P12645 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BMP3P12645 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BMP3P12645 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BMP3P12645 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BMP3P12645 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.44■□□□□ 0.7
BMP3P12645 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.44■□□□□ 0.7
BMP3P12645 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.44■□□□□ 0.7
BMP3P12645 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BMP3P12645 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
BMP3P12645 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BMP3P12645 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BMP3P12645 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
BMP3P12645 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BMP3P12645 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.44■□□□□ 0.7
BMP3P12645 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BMP3P12645 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BMP3P12645 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.44■□□□□ 0.7
BMP3P12645 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
BMP3P12645 AC139713.2-201ENST00000641328 2723 ntBASIC19.44■□□□□ 0.7
BMP3P12645 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BMP3P12645 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
BMP3P12645 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BMP3P12645 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
BMP3P12645 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.43■□□□□ 0.7
BMP3P12645 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms