Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT3P12035 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
KRT3P12035 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KRT3P12035 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT3P12035 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KRT3P12035 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT3P12035 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KRT3P12035 KRT18P27-201ENST00000427733 1299 ntBASIC17.87■□□□□ 0.45
KRT3P12035 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.87■□□□□ 0.45
KRT3P12035 KRT18P67-201ENST00000432816 1264 ntBASIC17.87■□□□□ 0.45
KRT3P12035 HNRNPDP1-201ENST00000439535 754 ntBASIC17.87■□□□□ 0.45
KRT3P12035 AC018712.1-201ENST00000455767 687 ntBASIC17.87■□□□□ 0.45
KRT3P12035 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KRT3P12035 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.87■□□□□ 0.45
KRT3P12035 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.87■□□□□ 0.45
KRT3P12035 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.87■□□□□ 0.45
KRT3P12035 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.87■□□□□ 0.45
KRT3P12035 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KRT3P12035 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
KRT3P12035 AL805961.1-202ENST00000641562 540 ntBASIC17.87■□□□□ 0.45
KRT3P12035 AF228730.7-201ENST00000641842 219 ntBASIC17.87■□□□□ 0.45
KRT3P12035 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KRT3P12035 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT3P12035 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KRT3P12035 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KRT3P12035 AL645728.1-201ENST00000366221 2101 ntBASIC17.87■□□□□ 0.45
KRT3P12035 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
KRT3P12035 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT3P12035 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KRT3P12035 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.87■□□□□ 0.45
KRT3P12035 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT3P12035 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT3P12035 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.87■□□□□ 0.45
KRT3P12035 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT3P12035 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
KRT3P12035 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
KRT3P12035 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT3P12035 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT3P12035 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
KRT3P12035 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.86■□□□□ 0.45
KRT3P12035 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KRT3P12035 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT3P12035 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
KRT3P12035 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KRT3P12035 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT3P12035 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
KRT3P12035 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KRT3P12035 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT3P12035 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT3P12035 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
KRT3P12035 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.86■□□□□ 0.45
KRT3P12035 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KRT3P12035 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KRT3P12035 AC073621.1-201ENST00000392730 636 ntBASIC17.86■□□□□ 0.45
KRT3P12035 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.86■□□□□ 0.45
KRT3P12035 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.86■□□□□ 0.45
KRT3P12035 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.86■□□□□ 0.45
KRT3P12035 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
KRT3P12035 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT3P12035 KRT8P49-201ENST00000604166 1432 ntBASIC17.86■□□□□ 0.45
KRT3P12035 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.86■□□□□ 0.45
KRT3P12035 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT3P12035 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT3P12035 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT3P12035 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
KRT3P12035 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT3P12035 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
KRT3P12035 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KRT3P12035 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT3P12035 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
KRT3P12035 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT3P12035 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.86■□□□□ 0.45
KRT3P12035 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT3P12035 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KRT3P12035 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.85■□□□□ 0.45
KRT3P12035 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT3P12035 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.85■□□□□ 0.45
KRT3P12035 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT3P12035 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT3P12035 RPS2P28-201ENST00000314255 741 ntBASIC17.85■□□□□ 0.45
KRT3P12035 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT3P12035 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.85■□□□□ 0.45
KRT3P12035 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT3P12035 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.85■□□□□ 0.45
KRT3P12035 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
KRT3P12035 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT3P12035 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.85■□□□□ 0.45
KRT3P12035 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.85■□□□□ 0.45
KRT3P12035 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
KRT3P12035 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.85■□□□□ 0.45
KRT3P12035 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
KRT3P12035 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.85■□□□□ 0.45
KRT3P12035 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.85■□□□□ 0.45
KRT3P12035 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.85■□□□□ 0.45
KRT3P12035 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.85■□□□□ 0.45
KRT3P12035 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
KRT3P12035 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.85■□□□□ 0.45
KRT3P12035 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.85■□□□□ 0.45
KRT3P12035 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.85■□□□□ 0.45
KRT3P12035 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms