Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
HLA-DOAP06340 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DOAP06340 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DOAP06340 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DOAP06340 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DOAP06340 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.88■□□□□ 0.77
HLA-DOAP06340 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DOAP06340 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
HLA-DOAP06340 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DOAP06340 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DOAP06340 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.88■□□□□ 0.77
HLA-DOAP06340 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DOAP06340 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DOAP06340 FAM58DP-201ENST00000428076 619 ntBASIC19.88■□□□□ 0.77
HLA-DOAP06340 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DOAP06340 AC067863.1-201ENST00000494933 530 ntBASIC19.88■□□□□ 0.77
HLA-DOAP06340 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.88■□□□□ 0.77
HLA-DOAP06340 MIR4492-201ENST00000581627 80 ntBASIC19.88■□□□□ 0.77
HLA-DOAP06340 AC011467.4-201ENST00000594891 528 ntBASIC19.88■□□□□ 0.77
HLA-DOAP06340 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DOAP06340 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.88■□□□□ 0.77
HLA-DOAP06340 Z92544.3-201ENST00000624747 417 ntBASIC19.88■□□□□ 0.77
HLA-DOAP06340 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.88■□□□□ 0.77
HLA-DOAP06340 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DOAP06340 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DOAP06340 AC067852.2-201ENST00000590513 2313 ntBASIC19.88■□□□□ 0.77
HLA-DOAP06340 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DOAP06340 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.88■□□□□ 0.77
HLA-DOAP06340 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
HLA-DOAP06340 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DOAP06340 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DOAP06340 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.88■□□□□ 0.77
HLA-DOAP06340 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DOAP06340 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
HLA-DOAP06340 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DOAP06340 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.87■□□□□ 0.77
HLA-DOAP06340 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DOAP06340 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.87■□□□□ 0.77
HLA-DOAP06340 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DOAP06340 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DOAP06340 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.87■□□□□ 0.77
HLA-DOAP06340 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DOAP06340 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.87■□□□□ 0.77
HLA-DOAP06340 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DOAP06340 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.87■□□□□ 0.77
HLA-DOAP06340 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DOAP06340 RBPMS2P1-201ENST00000437762 623 ntBASIC19.87■□□□□ 0.77
HLA-DOAP06340 CNN2P2-201ENST00000443536 909 ntBASIC19.87■□□□□ 0.77
HLA-DOAP06340 CNN2P3-201ENST00000450201 906 ntBASIC19.87■□□□□ 0.77
HLA-DOAP06340 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.87■□□□□ 0.77
HLA-DOAP06340 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.87■□□□□ 0.77
HLA-DOAP06340 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.87■□□□□ 0.77
HLA-DOAP06340 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.87■□□□□ 0.77
HLA-DOAP06340 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.87■□□□□ 0.77
HLA-DOAP06340 LINC01225-203ENST00000563550 1244 ntBASIC19.87■□□□□ 0.77
HLA-DOAP06340 AC015911.4-201ENST00000588022 1070 ntBASIC19.87■□□□□ 0.77
HLA-DOAP06340 AC021097.1-201ENST00000607902 574 ntBASIC19.87■□□□□ 0.77
HLA-DOAP06340 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.87■□□□□ 0.77
HLA-DOAP06340 AL136317.3-201ENST00000618497 906 ntBASIC19.87■□□□□ 0.77
HLA-DOAP06340 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.87■□□□□ 0.77
HLA-DOAP06340 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.87■□□□□ 0.77
HLA-DOAP06340 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.87■□□□□ 0.77
HLA-DOAP06340 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
HLA-DOAP06340 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
HLA-DOAP06340 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DOAP06340 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DOAP06340 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DOAP06340 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DOAP06340 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
HLA-DOAP06340 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DOAP06340 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.87■□□□□ 0.77
HLA-DOAP06340 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.87■□□□□ 0.77
HLA-DOAP06340 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DOAP06340 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DOAP06340 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DOAP06340 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DOAP06340 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DOAP06340 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DOAP06340 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DOAP06340 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
HLA-DOAP06340 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
HLA-DOAP06340 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DOAP06340 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DOAP06340 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.86■□□□□ 0.77
HLA-DOAP06340 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.86■□□□□ 0.77
HLA-DOAP06340 AC108860.2-201ENST00000562760 2183 ntBASIC19.86■□□□□ 0.77
HLA-DOAP06340 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
HLA-DOAP06340 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
HLA-DOAP06340 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DOAP06340 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DOAP06340 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DOAP06340 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DOAP06340 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DOAP06340 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DOAP06340 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.86■□□□□ 0.77
HLA-DOAP06340 LINC00896-202ENST00000609602 2128 ntBASIC19.86■□□□□ 0.77
HLA-DOAP06340 AP001059.3-201ENST00000619053 235 ntBASIC19.86■□□□□ 0.77
HLA-DOAP06340 AC008267.7-201ENST00000624570 1194 ntBASIC19.86■□□□□ 0.77
HLA-DOAP06340 AC016027.1-202ENST00000607927 1699 ntBASIC19.86■□□□□ 0.77
HLA-DOAP06340 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms