Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERBB2P04626 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ERBB2P04626 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERBB2P04626 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
ERBB2P04626 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.79■□□□□ 0.44
ERBB2P04626 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.79■□□□□ 0.44
ERBB2P04626 IL9RP2-201ENST00000423948 1312 ntBASIC17.79■□□□□ 0.44
ERBB2P04626 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.79■□□□□ 0.44
ERBB2P04626 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERBB2P04626 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ERBB2P04626 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
ERBB2P04626 PMS2P1-201ENST00000431037 1228 ntBASIC17.79■□□□□ 0.44
ERBB2P04626 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.79■□□□□ 0.44
ERBB2P04626 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERBB2P04626 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.79■□□□□ 0.44
ERBB2P04626 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
ERBB2P04626 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERBB2P04626 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.79■□□□□ 0.44
ERBB2P04626 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.79■□□□□ 0.44
ERBB2P04626 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ERBB2P04626 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERBB2P04626 AC006277.1-201ENST00000624348 1610 ntBASIC17.79■□□□□ 0.44
ERBB2P04626 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
ERBB2P04626 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERBB2P04626 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
ERBB2P04626 UBALD1-205ENST00000590891 2641 ntBASIC17.79■□□□□ 0.44
ERBB2P04626 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERBB2P04626 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERBB2P04626 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERBB2P04626 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERBB2P04626 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERBB2P04626 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERBB2P04626 AC129492.6-201ENST00000611383 1305 ntBASIC17.78■□□□□ 0.44
ERBB2P04626 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.78■□□□□ 0.44
ERBB2P04626 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERBB2P04626 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
ERBB2P04626 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERBB2P04626 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERBB2P04626 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERBB2P04626 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERBB2P04626 IGLL3P-201ENST00000412472 434 ntBASIC17.78■□□□□ 0.44
ERBB2P04626 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
ERBB2P04626 PRSS29P-201ENST00000440800 595 ntBASIC17.78■□□□□ 0.44
ERBB2P04626 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.78■□□□□ 0.44
ERBB2P04626 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.78■□□□□ 0.44
ERBB2P04626 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.78■□□□□ 0.44
ERBB2P04626 Z83851.2-201ENST00000609564 659 ntBASIC17.78■□□□□ 0.44
ERBB2P04626 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERBB2P04626 AC104109.2-201ENST00000602919 1418 ntBASIC17.78■□□□□ 0.44
ERBB2P04626 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERBB2P04626 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.78■□□□□ 0.44
ERBB2P04626 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ERBB2P04626 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.78■□□□□ 0.44
ERBB2P04626 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ERBB2P04626 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.78■□□□□ 0.44
ERBB2P04626 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERBB2P04626 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ERBB2P04626 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERBB2P04626 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ERBB2P04626 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.78■□□□□ 0.44
ERBB2P04626 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ERBB2P04626 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ERBB2P04626 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
ERBB2P04626 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ERBB2P04626 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ERBB2P04626 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ERBB2P04626 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ERBB2P04626 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
ERBB2P04626 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.77■□□□□ 0.44
ERBB2P04626 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.77■□□□□ 0.44
ERBB2P04626 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ERBB2P04626 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ERBB2P04626 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ERBB2P04626 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ERBB2P04626 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ERBB2P04626 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ERBB2P04626 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ERBB2P04626 AL590627.1-203ENST00000421194 1026 ntBASIC17.77■□□□□ 0.44
ERBB2P04626 SLC25A1P1-201ENST00000528351 927 ntBASIC17.77■□□□□ 0.44
ERBB2P04626 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ERBB2P04626 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.77■□□□□ 0.44
ERBB2P04626 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.77■□□□□ 0.44
ERBB2P04626 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
ERBB2P04626 AC034105.1-201ENST00000563488 319 ntBASIC17.77■□□□□ 0.44
ERBB2P04626 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.77■□□□□ 0.44
ERBB2P04626 MIR4492-201ENST00000581627 80 ntBASIC17.77■□□□□ 0.44
ERBB2P04626 AC013467.2-201ENST00000605472 835 ntBASIC17.77■□□□□ 0.44
ERBB2P04626 ACTL9-202ENST00000612068 1252 ntBASIC17.77■□□□□ 0.44
ERBB2P04626 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ERBB2P04626 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
ERBB2P04626 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ERBB2P04626 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ERBB2P04626 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ERBB2P04626 HLA-A-202ENST00000376806 1854 ntBASIC17.77■□□□□ 0.43
ERBB2P04626 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.77■□□□□ 0.43
ERBB2P04626 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
ERBB2P04626 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ERBB2P04626 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.77■□□□□ 0.43
ERBB2P04626 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ERBB2P04626 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms