Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TOMM40O96008 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TOMM40O96008 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TOMM40O96008 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TOMM40O96008 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.34□□□□□ -0.27
TOMM40O96008 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TOMM40O96008 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TOMM40O96008 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TOMM40O96008 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TOMM40O96008 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.34□□□□□ -0.27
TOMM40O96008 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TOMM40O96008 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.27
TOMM40O96008 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TOMM40O96008 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.33□□□□□ -0.27
TOMM40O96008 AC008741.2-201ENST00000612792 3115 ntBASIC13.33□□□□□ -0.27
TOMM40O96008 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TOMM40O96008 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TOMM40O96008 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TOMM40O96008 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.33□□□□□ -0.28
TOMM40O96008 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TOMM40O96008 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TOMM40O96008 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TOMM40O96008 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.33□□□□□ -0.28
TOMM40O96008 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.33□□□□□ -0.28
TOMM40O96008 AC078925.2-201ENST00000624013 1973 ntBASIC13.33□□□□□ -0.28
TOMM40O96008 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TOMM40O96008 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.33□□□□□ -0.28
TOMM40O96008 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
TOMM40O96008 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TOMM40O96008 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TOMM40O96008 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TOMM40O96008 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.33□□□□□ -0.28
TOMM40O96008 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TOMM40O96008 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TOMM40O96008 DRAXINP1-201ENST00000437611 948 ntBASIC13.33□□□□□ -0.28
TOMM40O96008 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TOMM40O96008 FAM86EP-206ENST00000510506 987 ntBASIC13.33□□□□□ -0.28
TOMM40O96008 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TOMM40O96008 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TOMM40O96008 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TOMM40O96008 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TOMM40O96008 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TOMM40O96008 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TOMM40O96008 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TOMM40O96008 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.33□□□□□ -0.28
TOMM40O96008 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TOMM40O96008 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TOMM40O96008 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.33□□□□□ -0.28
TOMM40O96008 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.33□□□□□ -0.28
TOMM40O96008 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TOMM40O96008 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.33□□□□□ -0.28
TOMM40O96008 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.33□□□□□ -0.28
TOMM40O96008 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TOMM40O96008 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.33□□□□□ -0.28
TOMM40O96008 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TOMM40O96008 LINC02199-201ENST00000506655 2702 ntBASIC13.33□□□□□ -0.28
TOMM40O96008 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.33□□□□□ -0.28
TOMM40O96008 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TOMM40O96008 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
TOMM40O96008 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.32□□□□□ -0.28
TOMM40O96008 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TOMM40O96008 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TOMM40O96008 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TOMM40O96008 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.32□□□□□ -0.28
TOMM40O96008 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
TOMM40O96008 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TOMM40O96008 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TOMM40O96008 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TOMM40O96008 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TOMM40O96008 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TOMM40O96008 HYMAI-201ENST00000635591 3347 ntBASIC13.32□□□□□ -0.28
TOMM40O96008 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TOMM40O96008 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TOMM40O96008 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TOMM40O96008 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TOMM40O96008 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TOMM40O96008 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TOMM40O96008 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TOMM40O96008 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TOMM40O96008 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TOMM40O96008 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TOMM40O96008 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.32□□□□□ -0.28
TOMM40O96008 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TOMM40O96008 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.32□□□□□ -0.28
TOMM40O96008 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TOMM40O96008 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.32□□□□□ -0.28
TOMM40O96008 AC096582.2-201ENST00000510860 516 ntBASIC13.32□□□□□ -0.28
TOMM40O96008 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.32□□□□□ -0.28
TOMM40O96008 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.32□□□□□ -0.28
TOMM40O96008 AL049597.2-201ENST00000565575 961 ntBASIC13.32□□□□□ -0.28
TOMM40O96008 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.32□□□□□ -0.28
TOMM40O96008 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.32□□□□□ -0.28
TOMM40O96008 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TOMM40O96008 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.32□□□□□ -0.28
TOMM40O96008 INTS4P1-201ENST00000438455 1935 ntBASIC13.32□□□□□ -0.28
TOMM40O96008 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TOMM40O96008 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TOMM40O96008 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
TOMM40O96008 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.32□□□□□ -0.28
TOMM40O96008 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms