Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZBED1O96006 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZBED1O96006 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZBED1O96006 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZBED1O96006 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZBED1O96006 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZBED1O96006 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZBED1O96006 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ZBED1O96006 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZBED1O96006 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.91■□□□□ 0.46
ZBED1O96006 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ZBED1O96006 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZBED1O96006 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZBED1O96006 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZBED1O96006 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZBED1O96006 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZBED1O96006 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZBED1O96006 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZBED1O96006 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
ZBED1O96006 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
ZBED1O96006 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ZBED1O96006 MIR940-201ENST00000401276 94 ntBASIC17.91■□□□□ 0.46
ZBED1O96006 MED15P5-201ENST00000423150 992 ntBASIC17.91■□□□□ 0.46
ZBED1O96006 AC007967.2-201ENST00000432613 625 ntBASIC17.91■□□□□ 0.46
ZBED1O96006 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZBED1O96006 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.91■□□□□ 0.46
ZBED1O96006 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.91■□□□□ 0.46
ZBED1O96006 AC140113.2-201ENST00000604370 208 ntBASIC17.91■□□□□ 0.46
ZBED1O96006 FAM197Y3-203ENST00000618346 717 ntBASIC17.91■□□□□ 0.46
ZBED1O96006 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.91■□□□□ 0.46
ZBED1O96006 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
ZBED1O96006 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZBED1O96006 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
ZBED1O96006 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZBED1O96006 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ZBED1O96006 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZBED1O96006 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZBED1O96006 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZBED1O96006 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZBED1O96006 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ZBED1O96006 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZBED1O96006 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.91■□□□□ 0.46
ZBED1O96006 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
ZBED1O96006 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.91■□□□□ 0.46
ZBED1O96006 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.91■□□□□ 0.46
ZBED1O96006 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZBED1O96006 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.91■□□□□ 0.46
ZBED1O96006 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZBED1O96006 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZBED1O96006 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZBED1O96006 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
ZBED1O96006 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
ZBED1O96006 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
ZBED1O96006 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZBED1O96006 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZBED1O96006 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.9■□□□□ 0.46
ZBED1O96006 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZBED1O96006 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZBED1O96006 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZBED1O96006 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
ZBED1O96006 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZBED1O96006 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZBED1O96006 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.9■□□□□ 0.46
ZBED1O96006 AC060834.1-201ENST00000443027 2032 ntBASIC17.9■□□□□ 0.46
ZBED1O96006 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZBED1O96006 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
ZBED1O96006 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
ZBED1O96006 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.9■□□□□ 0.46
ZBED1O96006 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.9■□□□□ 0.46
ZBED1O96006 HCG4B-203ENST00000450128 991 ntBASIC17.9■□□□□ 0.46
ZBED1O96006 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.9■□□□□ 0.46
ZBED1O96006 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.9■□□□□ 0.46
ZBED1O96006 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.9■□□□□ 0.46
ZBED1O96006 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZBED1O96006 AC064836.3-201ENST00000607928 673 ntBASIC17.9■□□□□ 0.46
ZBED1O96006 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZBED1O96006 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZBED1O96006 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZBED1O96006 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZBED1O96006 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZBED1O96006 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZBED1O96006 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
ZBED1O96006 AC092053.1-201ENST00000605787 1936 ntBASIC17.9■□□□□ 0.46
ZBED1O96006 AC002310.6-201ENST00000624451 1377 ntBASIC17.9■□□□□ 0.46
ZBED1O96006 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZBED1O96006 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
ZBED1O96006 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ZBED1O96006 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZBED1O96006 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZBED1O96006 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZBED1O96006 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.89■□□□□ 0.45
ZBED1O96006 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZBED1O96006 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZBED1O96006 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
ZBED1O96006 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZBED1O96006 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZBED1O96006 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZBED1O96006 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
ZBED1O96006 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZBED1O96006 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms