Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.48■□□□□ 0.71
MBD3O95983 SNORA78-201ENST00000459373 127 ntBASIC19.48■□□□□ 0.71
MBD3O95983 AC092597.1-201ENST00000487352 616 ntBASIC19.48■□□□□ 0.71
MBD3O95983 AL441883.1-201ENST00000566170 1045 ntBASIC19.48■□□□□ 0.71
MBD3O95983 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MBD3O95983 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.48■□□□□ 0.71
MBD3O95983 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
MBD3O95983 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.48■□□□□ 0.71
MBD3O95983 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.48■□□□□ 0.71
MBD3O95983 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD3O95983 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
MBD3O95983 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
MBD3O95983 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD3O95983 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC19.48■□□□□ 0.71
MBD3O95983 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
MBD3O95983 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
MBD3O95983 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MBD3O95983 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MBD3O95983 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3O95983 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3O95983 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.47■□□□□ 0.71
MBD3O95983 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3O95983 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3O95983 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3O95983 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
MBD3O95983 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3O95983 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3O95983 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3O95983 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3O95983 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
MBD3O95983 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.47■□□□□ 0.71
MBD3O95983 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3O95983 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3O95983 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.47■□□□□ 0.71
MBD3O95983 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3O95983 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.47■□□□□ 0.71
MBD3O95983 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
MBD3O95983 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.47■□□□□ 0.71
MBD3O95983 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.47■□□□□ 0.71
MBD3O95983 AL603832.2-201ENST00000566195 2125 ntBASIC19.47■□□□□ 0.71
MBD3O95983 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.47■□□□□ 0.71
MBD3O95983 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3O95983 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19.47■□□□□ 0.71
MBD3O95983 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3O95983 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3O95983 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3O95983 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.47■□□□□ 0.71
MBD3O95983 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
MBD3O95983 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3O95983 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3O95983 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MBD3O95983 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.47■□□□□ 0.71
MBD3O95983 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3O95983 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC19.46■□□□□ 0.71
MBD3O95983 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3O95983 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3O95983 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.46■□□□□ 0.71
MBD3O95983 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3O95983 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.46■□□□□ 0.71
MBD3O95983 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3O95983 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3O95983 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3O95983 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.46■□□□□ 0.71
MBD3O95983 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3O95983 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.46■□□□□ 0.71
MBD3O95983 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
MBD3O95983 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.46■□□□□ 0.71
MBD3O95983 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
MBD3O95983 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
MBD3O95983 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.46■□□□□ 0.71
MBD3O95983 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3O95983 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.46■□□□□ 0.71
MBD3O95983 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.46■□□□□ 0.71
MBD3O95983 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3O95983 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.46■□□□□ 0.71
MBD3O95983 AL138831.2-201ENST00000606564 490 ntBASIC19.46■□□□□ 0.71
MBD3O95983 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3O95983 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3O95983 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.46■□□□□ 0.71
MBD3O95983 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3O95983 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
MBD3O95983 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3O95983 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC19.46■□□□□ 0.71
MBD3O95983 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3O95983 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3O95983 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3O95983 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3O95983 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
MBD3O95983 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MBD3O95983 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.7
MBD3O95983 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3O95983 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.45■□□□□ 0.7
MBD3O95983 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3O95983 AL021920.2-201ENST00000624828 1351 ntBASIC19.45■□□□□ 0.7
MBD3O95983 LINC01568-207ENST00000641790 1380 ntBASIC19.45■□□□□ 0.7
MBD3O95983 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.45■□□□□ 0.7
MBD3O95983 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.45■□□□□ 0.7
MBD3O95983 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3O95983 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3O95983 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms