Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN3O95197 LINC00896-202ENST00000609602 2128 ntBASIC17.86■□□□□ 0.45
RTN3O95197 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN3O95197 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.86■□□□□ 0.45
RTN3O95197 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN3O95197 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.86■□□□□ 0.45
RTN3O95197 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTN3O95197 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.86■□□□□ 0.45
RTN3O95197 AC074386.1-202ENST00000463561 864 ntBASIC17.86■□□□□ 0.45
RTN3O95197 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
RTN3O95197 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.86■□□□□ 0.45
RTN3O95197 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.86■□□□□ 0.45
RTN3O95197 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTN3O95197 REXO1L3P-201ENST00000622202 1288 ntBASIC17.86■□□□□ 0.45
RTN3O95197 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.86■□□□□ 0.45
RTN3O95197 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RTN3O95197 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.86■□□□□ 0.45
RTN3O95197 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN3O95197 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN3O95197 CROCCP2-202ENST00000412962 2773 ntBASIC17.86■□□□□ 0.45
RTN3O95197 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN3O95197 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTN3O95197 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.86■□□□□ 0.45
RTN3O95197 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.86■□□□□ 0.45
RTN3O95197 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.86■□□□□ 0.45
RTN3O95197 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN3O95197 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN3O95197 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTN3O95197 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
RTN3O95197 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTN3O95197 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN3O95197 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN3O95197 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.86■□□□□ 0.45
RTN3O95197 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTN3O95197 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RTN3O95197 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
RTN3O95197 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RTN3O95197 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTN3O95197 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTN3O95197 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTN3O95197 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTN3O95197 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.85■□□□□ 0.45
RTN3O95197 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RTN3O95197 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.85■□□□□ 0.45
RTN3O95197 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RTN3O95197 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTN3O95197 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RTN3O95197 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RTN3O95197 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.85■□□□□ 0.45
RTN3O95197 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.85■□□□□ 0.45
RTN3O95197 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.85■□□□□ 0.45
RTN3O95197 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.85■□□□□ 0.45
RTN3O95197 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.85■□□□□ 0.45
RTN3O95197 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.85■□□□□ 0.45
RTN3O95197 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RTN3O95197 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.85■□□□□ 0.45
RTN3O95197 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.85■□□□□ 0.45
RTN3O95197 AC005829.1-201ENST00000570002 483 ntBASIC17.85■□□□□ 0.45
RTN3O95197 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RTN3O95197 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.85■□□□□ 0.45
RTN3O95197 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.85■□□□□ 0.45
RTN3O95197 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.85■□□□□ 0.45
RTN3O95197 C20orf181-201ENST00000623918 480 ntBASIC17.85■□□□□ 0.45
RTN3O95197 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.85■□□□□ 0.45
RTN3O95197 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RTN3O95197 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RTN3O95197 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.84■□□□□ 0.45
RTN3O95197 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RTN3O95197 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RTN3O95197 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RTN3O95197 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTN3O95197 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.84■□□□□ 0.45
RTN3O95197 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.84■□□□□ 0.45
RTN3O95197 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.84■□□□□ 0.45
RTN3O95197 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RTN3O95197 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN3O95197 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.84■□□□□ 0.45
RTN3O95197 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN3O95197 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.84■□□□□ 0.45
RTN3O95197 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.84■□□□□ 0.45
RTN3O95197 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.84■□□□□ 0.45
RTN3O95197 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.84■□□□□ 0.45
RTN3O95197 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.84■□□□□ 0.45
RTN3O95197 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RTN3O95197 AC005412.3-201ENST00000580309 715 ntBASIC17.84■□□□□ 0.45
RTN3O95197 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.84■□□□□ 0.45
RTN3O95197 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN3O95197 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN3O95197 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTN3O95197 AC080080.1-201ENST00000625121 2420 ntBASIC17.84■□□□□ 0.45
RTN3O95197 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RTN3O95197 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN3O95197 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RTN3O95197 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RTN3O95197 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN3O95197 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.84■□□□□ 0.45
RTN3O95197 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN3O95197 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN3O95197 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN3O95197 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms