Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SCAF4O95104 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCAF4O95104 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
SCAF4O95104 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCAF4O95104 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SCAF4O95104 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCAF4O95104 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.97□□□□□ -0.17
SCAF4O95104 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SCAF4O95104 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
SCAF4O95104 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SCAF4O95104 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.97□□□□□ -0.17
SCAF4O95104 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.97□□□□□ -0.17
SCAF4O95104 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SCAF4O95104 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.97□□□□□ -0.17
SCAF4O95104 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCAF4O95104 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC13.97□□□□□ -0.17
SCAF4O95104 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SCAF4O95104 LINC01238-205ENST00000567549 1107 ntBASIC13.97□□□□□ -0.17
SCAF4O95104 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.97□□□□□ -0.17
SCAF4O95104 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.97□□□□□ -0.17
SCAF4O95104 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SCAF4O95104 AC010331.1-201ENST00000611423 582 ntBASIC13.97□□□□□ -0.17
SCAF4O95104 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SCAF4O95104 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SCAF4O95104 AC093525.9-201ENST00000624961 1746 ntBASIC13.97□□□□□ -0.17
SCAF4O95104 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SCAF4O95104 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.97□□□□□ -0.17
SCAF4O95104 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SCAF4O95104 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.97□□□□□ -0.17
SCAF4O95104 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCAF4O95104 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SCAF4O95104 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SCAF4O95104 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SCAF4O95104 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.97□□□□□ -0.17
SCAF4O95104 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SCAF4O95104 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SCAF4O95104 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCAF4O95104 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SCAF4O95104 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SCAF4O95104 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCAF4O95104 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
SCAF4O95104 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SCAF4O95104 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCAF4O95104 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCAF4O95104 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.96□□□□□ -0.17
SCAF4O95104 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCAF4O95104 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.96□□□□□ -0.17
SCAF4O95104 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCAF4O95104 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SCAF4O95104 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCAF4O95104 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC13.96□□□□□ -0.17
SCAF4O95104 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCAF4O95104 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.96□□□□□ -0.17
SCAF4O95104 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCAF4O95104 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SCAF4O95104 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCAF4O95104 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCAF4O95104 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.96□□□□□ -0.18
SCAF4O95104 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
SCAF4O95104 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SCAF4O95104 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.96□□□□□ -0.18
SCAF4O95104 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SCAF4O95104 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
SCAF4O95104 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SCAF4O95104 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SCAF4O95104 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.96□□□□□ -0.18
SCAF4O95104 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SCAF4O95104 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.95□□□□□ -0.18
SCAF4O95104 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SCAF4O95104 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.95□□□□□ -0.18
SCAF4O95104 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC13.95□□□□□ -0.18
SCAF4O95104 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SCAF4O95104 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SCAF4O95104 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SCAF4O95104 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
SCAF4O95104 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SCAF4O95104 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.95□□□□□ -0.18
SCAF4O95104 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SCAF4O95104 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SCAF4O95104 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
SCAF4O95104 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SCAF4O95104 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SCAF4O95104 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SCAF4O95104 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SCAF4O95104 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.95□□□□□ -0.18
SCAF4O95104 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SCAF4O95104 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.95□□□□□ -0.18
SCAF4O95104 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.95□□□□□ -0.18
SCAF4O95104 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.95□□□□□ -0.18
SCAF4O95104 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SCAF4O95104 AC034232.1-201ENST00000506026 1064 ntBASIC13.95□□□□□ -0.18
SCAF4O95104 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
SCAF4O95104 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
SCAF4O95104 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.95□□□□□ -0.18
SCAF4O95104 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.95□□□□□ -0.18
SCAF4O95104 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SCAF4O95104 AC022616.7-201ENST00000525383 220 ntBASIC13.95□□□□□ -0.18
SCAF4O95104 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC13.95□□□□□ -0.18
SCAF4O95104 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC13.95□□□□□ -0.18
SCAF4O95104 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms