Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
SNCGO76070 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SNCGO76070 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC11.44□□□□□ -0.58
SNCGO76070 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SNCGO76070 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC11.44□□□□□ -0.58
SNCGO76070 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SNCGO76070 KIRREL3-AS3-201ENST00000404882 831 ntBASIC11.44□□□□□ -0.58
SNCGO76070 CYP2T1P-201ENST00000432607 1285 ntBASIC11.44□□□□□ -0.58
SNCGO76070 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SNCGO76070 AC009065.1-201ENST00000564055 1225 ntBASIC11.44□□□□□ -0.58
SNCGO76070 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
SNCGO76070 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SNCGO76070 RAB43-208ENST00000615093 783 ntTSL 5 BASIC11.44□□□□□ -0.58
SNCGO76070 AL121829.2-201ENST00000620908 328 ntBASIC11.44□□□□□ -0.58
SNCGO76070 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC11.44□□□□□ -0.58
SNCGO76070 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC11.44□□□□□ -0.58
SNCGO76070 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC11.44□□□□□ -0.58
SNCGO76070 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SNCGO76070 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SNCGO76070 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SNCGO76070 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SNCGO76070 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SNCGO76070 RCC2P3-201ENST00000418112 1537 ntBASIC11.44□□□□□ -0.58
SNCGO76070 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SNCGO76070 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SNCGO76070 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SNCGO76070 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
SNCGO76070 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SNCGO76070 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC11.44□□□□□ -0.58
SNCGO76070 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
SNCGO76070 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC11.44□□□□□ -0.58
SNCGO76070 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
SNCGO76070 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SNCGO76070 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SNCGO76070 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
SNCGO76070 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SNCGO76070 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SNCGO76070 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
SNCGO76070 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
SNCGO76070 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
SNCGO76070 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
SNCGO76070 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC11.43□□□□□ -0.58
SNCGO76070 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
SNCGO76070 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SNCGO76070 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SNCGO76070 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
SNCGO76070 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SNCGO76070 HLA-J-201ENST00000462773 1622 ntBASIC11.43□□□□□ -0.58
SNCGO76070 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC11.43□□□□□ -0.58
SNCGO76070 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC11.43□□□□□ -0.58
SNCGO76070 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC11.43□□□□□ -0.58
SNCGO76070 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SNCGO76070 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SNCGO76070 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SNCGO76070 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
SNCGO76070 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
SNCGO76070 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SNCGO76070 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
SNCGO76070 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SNCGO76070 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SNCGO76070 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SNCGO76070 UQCRFS1P1-201ENST00000435169 820 ntBASIC11.43□□□□□ -0.58
SNCGO76070 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC11.43□□□□□ -0.58
SNCGO76070 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC11.43□□□□□ -0.58
SNCGO76070 USP31-203ENST00000567975 2142 ntTSL 2 BASIC11.43□□□□□ -0.58
SNCGO76070 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC11.43□□□□□ -0.58
SNCGO76070 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC11.43□□□□□ -0.58
SNCGO76070 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC11.43□□□□□ -0.58
SNCGO76070 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SNCGO76070 LINC01451-201ENST00000623792 534 ntBASIC11.43□□□□□ -0.58
SNCGO76070 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SNCGO76070 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SNCGO76070 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
SNCGO76070 KRT17P1-201ENST00000399211 1546 ntBASIC11.43□□□□□ -0.58
SNCGO76070 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
SNCGO76070 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SNCGO76070 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SNCGO76070 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
SNCGO76070 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SNCGO76070 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
SNCGO76070 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SNCGO76070 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SNCGO76070 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SNCGO76070 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SNCGO76070 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
SNCGO76070 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC11.43□□□□□ -0.58
SNCGO76070 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SNCGO76070 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SNCGO76070 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
SNCGO76070 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC11.43□□□□□ -0.58
SNCGO76070 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SNCGO76070 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC11.43□□□□□ -0.58
SNCGO76070 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
SNCGO76070 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SNCGO76070 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SNCGO76070 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SNCGO76070 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC11.42□□□□□ -0.58
SNCGO76070 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC11.42□□□□□ -0.58
SNCGO76070 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
SNCGO76070 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms