Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AL021920.2-201ENST00000624828 1351 ntBASIC19.7■□□□□ 0.74
CTNND1O60716 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.7■□□□□ 0.74
CTNND1O60716 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNND1O60716 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CTNND1O60716 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNND1O60716 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNND1O60716 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
CTNND1O60716 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNND1O60716 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
CTNND1O60716 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNND1O60716 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.7■□□□□ 0.74
CTNND1O60716 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.7■□□□□ 0.74
CTNND1O60716 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.7■□□□□ 0.74
CTNND1O60716 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.7■□□□□ 0.74
CTNND1O60716 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.7■□□□□ 0.74
CTNND1O60716 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.7■□□□□ 0.74
CTNND1O60716 AL138918.1-201ENST00000568306 659 ntBASIC19.7■□□□□ 0.74
CTNND1O60716 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.7■□□□□ 0.74
CTNND1O60716 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.7■□□□□ 0.74
CTNND1O60716 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.7■□□□□ 0.74
CTNND1O60716 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.7■□□□□ 0.74
CTNND1O60716 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.7■□□□□ 0.74
CTNND1O60716 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CTNND1O60716 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNND1O60716 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNND1O60716 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
CTNND1O60716 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNND1O60716 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.7■□□□□ 0.74
CTNND1O60716 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTNND1O60716 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTNND1O60716 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTNND1O60716 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTNND1O60716 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTNND1O60716 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CTNND1O60716 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTNND1O60716 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTNND1O60716 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTNND1O60716 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTNND1O60716 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.69■□□□□ 0.74
CTNND1O60716 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CTNND1O60716 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.69■□□□□ 0.74
CTNND1O60716 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTNND1O60716 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTNND1O60716 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTNND1O60716 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
CTNND1O60716 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTNND1O60716 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.69■□□□□ 0.74
CTNND1O60716 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.69■□□□□ 0.74
CTNND1O60716 AL512638.1-201ENST00000457493 794 ntBASIC19.69■□□□□ 0.74
CTNND1O60716 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTNND1O60716 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.69■□□□□ 0.74
CTNND1O60716 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTNND1O60716 MIR4492-201ENST00000581627 80 ntBASIC19.69■□□□□ 0.74
CTNND1O60716 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.69■□□□□ 0.74
CTNND1O60716 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.69■□□□□ 0.74
CTNND1O60716 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.69■□□□□ 0.74
CTNND1O60716 FRMD8P1-201ENST00000440433 1524 ntBASIC19.69■□□□□ 0.74
CTNND1O60716 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.69■□□□□ 0.74
CTNND1O60716 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTNND1O60716 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTNND1O60716 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.69■□□□□ 0.74
CTNND1O60716 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTNND1O60716 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTNND1O60716 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTNND1O60716 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
CTNND1O60716 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTNND1O60716 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.69■□□□□ 0.74
CTNND1O60716 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CTNND1O60716 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
CTNND1O60716 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.68■□□□□ 0.74
CTNND1O60716 AC116353.5-201ENST00000638148 1699 ntBASIC19.68■□□□□ 0.74
CTNND1O60716 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CTNND1O60716 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.68■□□□□ 0.74
CTNND1O60716 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.68■□□□□ 0.74
CTNND1O60716 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.68■□□□□ 0.74
CTNND1O60716 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CTNND1O60716 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
CTNND1O60716 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CTNND1O60716 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CTNND1O60716 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTNND1O60716 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTNND1O60716 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.68■□□□□ 0.74
CTNND1O60716 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.68■□□□□ 0.74
CTNND1O60716 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.68■□□□□ 0.74
CTNND1O60716 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.68■□□□□ 0.74
CTNND1O60716 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.68■□□□□ 0.74
CTNND1O60716 MIR4453-201ENST00000584019 89 ntBASIC19.68■□□□□ 0.74
CTNND1O60716 CYP2A7P1-201ENST00000595391 815 ntBASIC19.68■□□□□ 0.74
CTNND1O60716 LINC02560-201ENST00000596379 459 ntBASIC19.68■□□□□ 0.74
CTNND1O60716 AC021097.1-201ENST00000607902 574 ntBASIC19.68■□□□□ 0.74
CTNND1O60716 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CTNND1O60716 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.68■□□□□ 0.74
CTNND1O60716 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTNND1O60716 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTNND1O60716 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTNND1O60716 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTNND1O60716 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTNND1O60716 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CTNND1O60716 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.68■□□□□ 0.74
CTNND1O60716 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms