Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 MKNK2P1-201ENST00000437526 628 ntBASIC15.2■□□□□ 0.02
ZIC3O60481 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.2■□□□□ 0.02
ZIC3O60481 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.2■□□□□ 0.02
ZIC3O60481 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.2■□□□□ 0.02
ZIC3O60481 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.2■□□□□ 0.02
ZIC3O60481 AL078644.1-201ENST00000609881 752 ntBASIC15.2■□□□□ 0.02
ZIC3O60481 AC006538.3-201ENST00000612495 578 ntBASIC15.2■□□□□ 0.02
ZIC3O60481 AP001350.2-201ENST00000625104 1094 ntBASIC15.2■□□□□ 0.02
ZIC3O60481 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
ZIC3O60481 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ZIC3O60481 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZIC3O60481 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.2■□□□□ 0.02
ZIC3O60481 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZIC3O60481 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ZIC3O60481 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZIC3O60481 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZIC3O60481 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
ZIC3O60481 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZIC3O60481 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZIC3O60481 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZIC3O60481 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZIC3O60481 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZIC3O60481 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZIC3O60481 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.19■□□□□ 0.02
ZIC3O60481 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
ZIC3O60481 AC105020.1-201ENST00000435356 2205 ntBASIC15.19■□□□□ 0.02
ZIC3O60481 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZIC3O60481 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZIC3O60481 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZIC3O60481 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.19■□□□□ 0.02
ZIC3O60481 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ZIC3O60481 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.19■□□□□ 0.02
ZIC3O60481 ALG1L5P-201ENST00000482043 771 ntBASIC15.19■□□□□ 0.02
ZIC3O60481 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.19■□□□□ 0.02
ZIC3O60481 YBX1P5-201ENST00000509441 847 ntBASIC15.19■□□□□ 0.02
ZIC3O60481 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.19■□□□□ 0.02
ZIC3O60481 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.19■□□□□ 0.02
ZIC3O60481 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZIC3O60481 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
ZIC3O60481 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZIC3O60481 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.19■□□□□ 0.02
ZIC3O60481 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.19■□□□□ 0.02
ZIC3O60481 AC091812.2-201ENST00000619081 385 ntBASIC15.19■□□□□ 0.02
ZIC3O60481 AC139530.3-201ENST00000620344 690 ntBASIC15.19■□□□□ 0.02
ZIC3O60481 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZIC3O60481 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.19■□□□□ 0.02
ZIC3O60481 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.19■□□□□ 0.02
ZIC3O60481 AC092902.6-201ENST00000641783 218 ntBASIC15.19■□□□□ 0.02
ZIC3O60481 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.19■□□□□ 0.02
ZIC3O60481 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZIC3O60481 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.19■□□□□ 0.02
ZIC3O60481 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZIC3O60481 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.19■□□□□ 0.02
ZIC3O60481 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZIC3O60481 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZIC3O60481 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZIC3O60481 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZIC3O60481 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZIC3O60481 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZIC3O60481 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
ZIC3O60481 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
ZIC3O60481 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZIC3O60481 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZIC3O60481 AC005915.1-201ENST00000624912 2018 ntBASIC15.19■□□□□ 0.02
ZIC3O60481 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZIC3O60481 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.19■□□□□ 0.02
ZIC3O60481 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ZIC3O60481 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.19■□□□□ 0.02
ZIC3O60481 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
ZIC3O60481 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZIC3O60481 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZIC3O60481 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.18■□□□□ 0.02
ZIC3O60481 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZIC3O60481 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZIC3O60481 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.18■□□□□ 0.02
ZIC3O60481 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
ZIC3O60481 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZIC3O60481 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
ZIC3O60481 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.18■□□□□ 0.02
ZIC3O60481 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZIC3O60481 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
ZIC3O60481 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.18■□□□□ 0.02
ZIC3O60481 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZIC3O60481 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZIC3O60481 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZIC3O60481 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
ZIC3O60481 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZIC3O60481 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZIC3O60481 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.18■□□□□ 0.02
ZIC3O60481 FAM58CP-201ENST00000435741 640 ntBASIC15.18■□□□□ 0.02
ZIC3O60481 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.18■□□□□ 0.02
ZIC3O60481 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.18■□□□□ 0.02
ZIC3O60481 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.18■□□□□ 0.02
ZIC3O60481 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.18■□□□□ 0.02
ZIC3O60481 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.18■□□□□ 0.02
ZIC3O60481 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.18■□□□□ 0.02
ZIC3O60481 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
ZIC3O60481 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.18■□□□□ 0.02
ZIC3O60481 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZIC3O60481 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms