Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC20.9■□□□□ 0.94
SMARCA5O60264 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.9■□□□□ 0.94
SMARCA5O60264 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCA5O60264 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCA5O60264 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCA5O60264 AL021920.2-201ENST00000624828 1351 ntBASIC20.9■□□□□ 0.94
SMARCA5O60264 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCA5O60264 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
SMARCA5O60264 PMS2P1-201ENST00000431037 1228 ntBASIC20.9■□□□□ 0.94
SMARCA5O60264 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCA5O60264 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.9■□□□□ 0.94
SMARCA5O60264 AL662844.1-201ENST00000546340 181 ntBASIC20.9■□□□□ 0.94
SMARCA5O60264 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.9■□□□□ 0.94
SMARCA5O60264 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
SMARCA5O60264 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.9■□□□□ 0.94
SMARCA5O60264 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
SMARCA5O60264 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCA5O60264 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCA5O60264 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SMARCA5O60264 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCA5O60264 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SMARCA5O60264 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCA5O60264 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCA5O60264 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.9■□□□□ 0.94
SMARCA5O60264 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SMARCA5O60264 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.89■□□□□ 0.94
SMARCA5O60264 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.89■□□□□ 0.94
SMARCA5O60264 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.89■□□□□ 0.94
SMARCA5O60264 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCA5O60264 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCA5O60264 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
SMARCA5O60264 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCA5O60264 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCA5O60264 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.89■□□□□ 0.93
SMARCA5O60264 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
SMARCA5O60264 AC026396.1-201ENST00000419388 421 ntBASIC20.89■□□□□ 0.93
SMARCA5O60264 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
SMARCA5O60264 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.89■□□□□ 0.93
SMARCA5O60264 AC009947.1-201ENST00000444350 727 ntBASIC20.89■□□□□ 0.93
SMARCA5O60264 AC108751.1-201ENST00000490852 363 ntBASIC20.89■□□□□ 0.93
SMARCA5O60264 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.89■□□□□ 0.93
SMARCA5O60264 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCA5O60264 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCA5O60264 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCA5O60264 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCA5O60264 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.89■□□□□ 0.93
SMARCA5O60264 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCA5O60264 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCA5O60264 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCA5O60264 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCA5O60264 SLC22A20-204ENST00000530038 1673 ntBASIC20.89■□□□□ 0.93
SMARCA5O60264 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.89■□□□□ 0.93
SMARCA5O60264 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCA5O60264 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCA5O60264 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCA5O60264 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCA5O60264 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCA5O60264 AC124067.4-201ENST00000519691 2379 ntBASIC20.88■□□□□ 0.93
SMARCA5O60264 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCA5O60264 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SMARCA5O60264 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.88■□□□□ 0.93
SMARCA5O60264 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.88■□□□□ 0.93
SMARCA5O60264 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCA5O60264 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCA5O60264 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.88■□□□□ 0.93
SMARCA5O60264 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.88■□□□□ 0.93
SMARCA5O60264 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
SMARCA5O60264 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCA5O60264 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.88■□□□□ 0.93
SMARCA5O60264 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SMARCA5O60264 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCA5O60264 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SMARCA5O60264 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCA5O60264 HLA-A-202ENST00000376806 1854 ntBASIC20.88■□□□□ 0.93
SMARCA5O60264 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.88■□□□□ 0.93
SMARCA5O60264 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCA5O60264 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.87■□□□□ 0.93
SMARCA5O60264 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCA5O60264 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.87■□□□□ 0.93
SMARCA5O60264 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.87■□□□□ 0.93
SMARCA5O60264 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCA5O60264 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
SMARCA5O60264 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SMARCA5O60264 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCA5O60264 TOP3BP1-201ENST00000420768 1380 ntBASIC20.87■□□□□ 0.93
SMARCA5O60264 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCA5O60264 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.87■□□□□ 0.93
SMARCA5O60264 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCA5O60264 AL671710.1-201ENST00000610245 2349 ntBASIC20.87■□□□□ 0.93
SMARCA5O60264 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SMARCA5O60264 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCA5O60264 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCA5O60264 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCA5O60264 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCA5O60264 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SMARCA5O60264 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SMARCA5O60264 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.87■□□□□ 0.93
SMARCA5O60264 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.87■□□□□ 0.93
SMARCA5O60264 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCA5O60264 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms