Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF13O43567 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
RNF13O43567 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF13O43567 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF13O43567 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF13O43567 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
RNF13O43567 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF13O43567 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF13O43567 HCG4P8-203ENST00000443049 980 ntBASIC15.49■□□□□ 0.07
RNF13O43567 FOSL1P1-201ENST00000511041 816 ntBASIC15.49■□□□□ 0.07
RNF13O43567 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF13O43567 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RNF13O43567 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
RNF13O43567 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF13O43567 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RNF13O43567 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RNF13O43567 LINC02199-201ENST00000506655 2702 ntBASIC15.49■□□□□ 0.07
RNF13O43567 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RNF13O43567 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF13O43567 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF13O43567 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF13O43567 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
RNF13O43567 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF13O43567 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RNF13O43567 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
RNF13O43567 RNF216P1-203ENST00000404404 2427 ntBASIC15.48■□□□□ 0.07
RNF13O43567 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF13O43567 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF13O43567 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF13O43567 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF13O43567 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF13O43567 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF13O43567 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
RNF13O43567 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF13O43567 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF13O43567 AC148477.5-201ENST00000625164 1645 ntBASIC15.48■□□□□ 0.07
RNF13O43567 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF13O43567 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
RNF13O43567 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF13O43567 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.48■□□□□ 0.07
RNF13O43567 SPDYE21P-201ENST00000413323 827 ntBASIC15.48■□□□□ 0.07
RNF13O43567 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
RNF13O43567 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF13O43567 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.48■□□□□ 0.07
RNF13O43567 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF13O43567 MIR3652-201ENST00000579335 131 ntBASIC15.48■□□□□ 0.07
RNF13O43567 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF13O43567 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF13O43567 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF13O43567 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF13O43567 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
RNF13O43567 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF13O43567 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF13O43567 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.48■□□□□ 0.07
RNF13O43567 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF13O43567 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RNF13O43567 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF13O43567 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF13O43567 AC026691.1-201ENST00000602502 2017 ntBASIC15.48■□□□□ 0.07
RNF13O43567 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF13O43567 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF13O43567 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF13O43567 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF13O43567 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF13O43567 AC008741.2-201ENST00000612792 3115 ntBASIC15.48■□□□□ 0.07
RNF13O43567 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF13O43567 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF13O43567 AC078925.2-201ENST00000624013 1973 ntBASIC15.47■□□□□ 0.07
RNF13O43567 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF13O43567 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF13O43567 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF13O43567 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF13O43567 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF13O43567 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF13O43567 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF13O43567 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF13O43567 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF13O43567 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF13O43567 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF13O43567 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF13O43567 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF13O43567 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.47■□□□□ 0.07
RNF13O43567 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.47■□□□□ 0.07
RNF13O43567 AC132008.2-207ENST00000454517 770 ntBASIC15.47■□□□□ 0.07
RNF13O43567 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RNF13O43567 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF13O43567 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF13O43567 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.47■□□□□ 0.07
RNF13O43567 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
RNF13O43567 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF13O43567 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF13O43567 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF13O43567 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF13O43567 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF13O43567 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF13O43567 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF13O43567 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RNF13O43567 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF13O43567 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF13O43567 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms