Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
PAX4O43316 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PAX4O43316 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.17□□□□□ -0.46
PAX4O43316 AL161772.1-201ENST00000610494 4412 ntBASIC12.17□□□□□ -0.46
PAX4O43316 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
PAX4O43316 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
PAX4O43316 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC12.16□□□□□ -0.46
PAX4O43316 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC12.16□□□□□ -0.46
PAX4O43316 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PAX4O43316 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PAX4O43316 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
PAX4O43316 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PAX4O43316 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12.16□□□□□ -0.46
PAX4O43316 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PAX4O43316 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PAX4O43316 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PAX4O43316 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PAX4O43316 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
PAX4O43316 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
PAX4O43316 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PAX4O43316 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PAX4O43316 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
PAX4O43316 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
PAX4O43316 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
PAX4O43316 AC004870.1-201ENST00000315132 882 ntBASIC12.16□□□□□ -0.46
PAX4O43316 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
PAX4O43316 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.16□□□□□ -0.46
PAX4O43316 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.16□□□□□ -0.46
PAX4O43316 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PAX4O43316 AL450487.1-201ENST00000426799 995 ntBASIC12.16□□□□□ -0.46
PAX4O43316 DUSP5P1-201ENST00000441325 1139 ntBASIC12.16□□□□□ -0.46
PAX4O43316 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC12.16□□□□□ -0.46
PAX4O43316 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
PAX4O43316 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC12.16□□□□□ -0.46
PAX4O43316 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC12.16□□□□□ -0.46
PAX4O43316 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC12.16□□□□□ -0.46
PAX4O43316 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.16□□□□□ -0.46
PAX4O43316 NKAPP1-205ENST00000585790 367 ntBASIC12.16□□□□□ -0.46
PAX4O43316 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.16□□□□□ -0.46
PAX4O43316 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PAX4O43316 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC12.16□□□□□ -0.46
PAX4O43316 AL022326.1-202ENST00000641533 845 ntBASIC12.16□□□□□ -0.46
PAX4O43316 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PAX4O43316 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC12.16□□□□□ -0.46
PAX4O43316 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PAX4O43316 AC093525.9-201ENST00000624961 1746 ntBASIC12.16□□□□□ -0.46
PAX4O43316 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PAX4O43316 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PAX4O43316 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PAX4O43316 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
PAX4O43316 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PAX4O43316 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PAX4O43316 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
PAX4O43316 BANP-227ENST00000626016 2144 ntTSL 2 BASIC12.16□□□□□ -0.46
PAX4O43316 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC12.16□□□□□ -0.46
PAX4O43316 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PAX4O43316 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
PAX4O43316 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
PAX4O43316 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PAX4O43316 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC12.15□□□□□ -0.46
PAX4O43316 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PAX4O43316 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PAX4O43316 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
PAX4O43316 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PAX4O43316 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
PAX4O43316 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PAX4O43316 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
PAX4O43316 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
PAX4O43316 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC12.15□□□□□ -0.46
PAX4O43316 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PAX4O43316 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
PAX4O43316 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PAX4O43316 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PAX4O43316 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PAX4O43316 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
PAX4O43316 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PAX4O43316 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PAX4O43316 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PAX4O43316 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
PAX4O43316 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC12.15□□□□□ -0.46
PAX4O43316 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.15□□□□□ -0.46
PAX4O43316 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PAX4O43316 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
PAX4O43316 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PAX4O43316 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC12.15□□□□□ -0.46
PAX4O43316 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PAX4O43316 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PAX4O43316 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC12.15□□□□□ -0.46
PAX4O43316 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.15□□□□□ -0.46
PAX4O43316 AC073592.4-201ENST00000623827 446 ntBASIC12.15□□□□□ -0.46
PAX4O43316 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
PAX4O43316 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PAX4O43316 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC12.15□□□□□ -0.46
PAX4O43316 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PAX4O43316 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC12.15□□□□□ -0.46
PAX4O43316 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PAX4O43316 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PAX4O43316 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PAX4O43316 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC12.15□□□□□ -0.46
PAX4O43316 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms