Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.09■□□□□ 0.17
UPK1AO00322 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
UPK1AO00322 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1AO00322 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1AO00322 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.09■□□□□ 0.17
UPK1AO00322 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.09■□□□□ 0.17
UPK1AO00322 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
UPK1AO00322 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1AO00322 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
UPK1AO00322 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
UPK1AO00322 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1AO00322 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
UPK1AO00322 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1AO00322 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1AO00322 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1AO00322 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
UPK1AO00322 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.09■□□□□ 0.17
UPK1AO00322 LINC00982-205ENST00000420957 435 ntBASIC16.09■□□□□ 0.17
UPK1AO00322 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
UPK1AO00322 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.09■□□□□ 0.17
UPK1AO00322 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1AO00322 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
UPK1AO00322 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.09■□□□□ 0.17
UPK1AO00322 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.09■□□□□ 0.17
UPK1AO00322 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1AO00322 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.09■□□□□ 0.17
UPK1AO00322 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.09■□□□□ 0.17
UPK1AO00322 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1AO00322 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.09■□□□□ 0.17
UPK1AO00322 AL139288.1-201ENST00000623748 933 ntBASIC16.09■□□□□ 0.17
UPK1AO00322 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
UPK1AO00322 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1AO00322 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1AO00322 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1AO00322 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1AO00322 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.09■□□□□ 0.17
UPK1AO00322 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1AO00322 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
UPK1AO00322 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1AO00322 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.09■□□□□ 0.17
UPK1AO00322 GPR89P-201ENST00000407924 1495 ntBASIC16.09■□□□□ 0.17
UPK1AO00322 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1AO00322 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1AO00322 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
UPK1AO00322 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
UPK1AO00322 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1AO00322 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UPK1AO00322 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
UPK1AO00322 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
UPK1AO00322 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
UPK1AO00322 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
UPK1AO00322 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
UPK1AO00322 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.17
UPK1AO00322 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.08■□□□□ 0.17
UPK1AO00322 AKR1C7P-201ENST00000305623 895 ntBASIC16.08■□□□□ 0.16
UPK1AO00322 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UPK1AO00322 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
UPK1AO00322 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UPK1AO00322 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
UPK1AO00322 FGFR3P6-201ENST00000457012 610 ntBASIC16.08■□□□□ 0.16
UPK1AO00322 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.08■□□□□ 0.16
UPK1AO00322 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.08■□□□□ 0.16
UPK1AO00322 AC008608.2-201ENST00000606089 416 ntBASIC16.08■□□□□ 0.16
UPK1AO00322 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UPK1AO00322 AL022326.1-202ENST00000641533 845 ntBASIC16.08■□□□□ 0.16
UPK1AO00322 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
UPK1AO00322 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
UPK1AO00322 AC024909.3-201ENST00000611513 2257 ntBASIC16.08■□□□□ 0.16
UPK1AO00322 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.08■□□□□ 0.16
UPK1AO00322 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.08■□□□□ 0.16
UPK1AO00322 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.08■□□□□ 0.16
UPK1AO00322 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
UPK1AO00322 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UPK1AO00322 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1AO00322 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1AO00322 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
UPK1AO00322 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1AO00322 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1AO00322 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1AO00322 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
UPK1AO00322 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1AO00322 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1AO00322 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1AO00322 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1AO00322 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.07■□□□□ 0.16
UPK1AO00322 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.07■□□□□ 0.16
UPK1AO00322 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.07■□□□□ 0.16
UPK1AO00322 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
UPK1AO00322 LINC01711-201ENST00000598340 967 ntBASIC16.07■□□□□ 0.16
UPK1AO00322 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1AO00322 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
UPK1AO00322 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1AO00322 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1AO00322 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.07■□□□□ 0.16
UPK1AO00322 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1AO00322 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1AO00322 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1AO00322 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1AO00322 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UPK1AO00322 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms