Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AC105020.1-201ENST00000435356 2205 ntBASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 KRT18P13-201ENST00000400056 1290 ntBASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 SPDYE21P-201ENST00000413323 827 ntBASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 IGHV3-52-201ENST00000519770 353 ntBASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AC092865.5-201ENST00000545435 363 ntBASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AC012640.2-201ENST00000561606 901 ntBASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 TK1-204ENST00000590430 683 ntTSL 3 BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AC006557.2-201ENST00000592985 1240 ntBASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AC027601.4-201ENST00000611259 610 ntBASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PCDHA14-201ENST00000506751 2298 ntBASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AC093525.9-201ENST00000624961 1746 ntBASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AC046185.3-201ENST00000623228 1824 ntBASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRBV4S1A1TA0A5B7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AC005915.1-201ENST00000624912 2018 ntBASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AC004817.3-201ENST00000602957 2129 ntBASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 MYCLP1-201ENST00000372451 1075 ntBASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 KLF4P1-201ENST00000412782 1185 ntBASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 RNA5SP415-201ENST00000517246 115 ntBASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 IGHV3-22-201ENST00000520721 359 ntBASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AC005593.1-201ENST00000624894 515 ntBASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms