Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 RCN1P2-201ENST00000398357 915 ntBASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 DRAXINP1-201ENST00000437611 948 ntBASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 KRT17P6-201ENST00000453795 1220 ntBASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC00959A0A1B0GUT2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
LINC00959A0A1B0GUT2 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
LINC00959A0A1B0GUT2 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC11.58□□□□□ -0.55
LINC00959A0A1B0GUT2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
LINC00959A0A1B0GUT2 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC11.58□□□□□ -0.55
LINC00959A0A1B0GUT2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
LINC00959A0A1B0GUT2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
LINC00959A0A1B0GUT2 CYP2T1P-202ENST00000641596 2535 ntBASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 NUS1P1-201ENST00000446295 882 ntBASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 TOB2P1-201ENST00000469761 992 ntBASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 FAM86EP-206ENST00000510506 987 ntBASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 TPSP2-201ENST00000561760 610 ntBASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 BNIP3P18-201ENST00000593976 575 ntBASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 NSUN5P1-202ENST00000421140 1535 ntBASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 NSUN5P2-203ENST00000457352 1529 ntBASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00959A0A1B0GUT2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms