Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.45■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 MED15P5-201ENST00000423150 992 ntBASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 PGAM5P1-201ENST00000518923 814 ntBASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 GPALPP1-207ENST00000611650 899 ntBASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 AC022211.2-201ENST00000585075 2527 ntBASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.43■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 KRT18P13-201ENST00000400056 1290 ntBASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms