Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DRB4X5D2U9 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
HLA-DRB4X5D2U9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
HLA-DRB4X5D2U9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DRB4X5D2U9 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DRB4X5D2U9 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DRB4X5D2U9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.99■□□□□ 0.47
HLA-DRB4X5D2U9 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DRB4X5D2U9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DRB4X5D2U9 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HLA-DRB4X5D2U9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC17.99■□□□□ 0.47
HLA-DRB4X5D2U9 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DRB4X5D2U9 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.98■□□□□ 0.47
HLA-DRB4X5D2U9 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.98■□□□□ 0.47
HLA-DRB4X5D2U9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC17.98■□□□□ 0.47
HLA-DRB4X5D2U9 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC17.98■□□□□ 0.47
HLA-DRB4X5D2U9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DRB4X5D2U9 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DRB4X5D2U9 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HLA-DRB4X5D2U9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HLA-DRB4X5D2U9 AC020928.2-201ENST00000588717 2197 ntBASIC17.97■□□□□ 0.47
HLA-DRB4X5D2U9 DUSP8P4-201ENST00000399538 1761 ntBASIC17.97■□□□□ 0.47
HLA-DRB4X5D2U9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.96■□□□□ 0.47
HLA-DRB4X5D2U9 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DRB4X5D2U9 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DRB4X5D2U9 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.96■□□□□ 0.47
HLA-DRB4X5D2U9 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DRB4X5D2U9 RNF126P1-201ENST00000567452 1320 ntBASIC17.96■□□□□ 0.46
HLA-DRB4X5D2U9 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
HLA-DRB4X5D2U9 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.95■□□□□ 0.46
HLA-DRB4X5D2U9 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DRB4X5D2U9 AC007029.1-201ENST00000604183 313 ntBASIC17.95■□□□□ 0.46
HLA-DRB4X5D2U9 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DRB4X5D2U9 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HLA-DRB4X5D2U9 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DRB4X5D2U9 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DRB4X5D2U9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.94■□□□□ 0.46
HLA-DRB4X5D2U9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
HLA-DRB4X5D2U9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC17.94■□□□□ 0.46
HLA-DRB4X5D2U9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DRB4X5D2U9 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DRB4X5D2U9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
HLA-DRB4X5D2U9 RP9P-202ENST00000450133 1212 ntBASIC17.94■□□□□ 0.46
HLA-DRB4X5D2U9 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DRB4X5D2U9 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC17.94■□□□□ 0.46
HLA-DRB4X5D2U9 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DRB4X5D2U9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DRB4X5D2U9 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HLA-DRB4X5D2U9 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
HLA-DRB4X5D2U9 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DRB4X5D2U9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
HLA-DRB4X5D2U9 AC010501.1-201ENST00000606270 1962 ntBASIC17.93■□□□□ 0.46
HLA-DRB4X5D2U9 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DRB4X5D2U9 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DRB4X5D2U9 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DRB4X5D2U9 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DRB4X5D2U9 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC17.93■□□□□ 0.46
HLA-DRB4X5D2U9 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DRB4X5D2U9 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.93■□□□□ 0.46
HLA-DRB4X5D2U9 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DRB4X5D2U9 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DRB4X5D2U9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
HLA-DRB4X5D2U9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DRB4X5D2U9 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC17.92■□□□□ 0.46
HLA-DRB4X5D2U9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DRB4X5D2U9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DRB4X5D2U9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DRB4X5D2U9 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DRB4X5D2U9 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HLA-DRB4X5D2U9 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.91■□□□□ 0.46
HLA-DRB4X5D2U9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DRB4X5D2U9 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DRB4X5D2U9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DRB4X5D2U9 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC17.91■□□□□ 0.46
HLA-DRB4X5D2U9 AC093536.1-201ENST00000569153 554 ntBASIC17.91■□□□□ 0.46
HLA-DRB4X5D2U9 HSD17B1P1-201ENST00000590052 955 ntBASIC17.91■□□□□ 0.46
HLA-DRB4X5D2U9 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC17.91■□□□□ 0.46
HLA-DRB4X5D2U9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
HLA-DRB4X5D2U9 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HLA-DRB4X5D2U9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HLA-DRB4X5D2U9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRB4X5D2U9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRB4X5D2U9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRB4X5D2U9 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRB4X5D2U9 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
HLA-DRB4X5D2U9 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.9■□□□□ 0.46
HLA-DRB4X5D2U9 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRB4X5D2U9 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRB4X5D2U9 ERN1-208ENST00000606895 2068 ntBASIC17.9■□□□□ 0.46
HLA-DRB4X5D2U9 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRB4X5D2U9 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.9■□□□□ 0.46
HLA-DRB4X5D2U9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRB4X5D2U9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC17.9■□□□□ 0.46
HLA-DRB4X5D2U9 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRB4X5D2U9 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRB4X5D2U9 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HLA-DRB4X5D2U9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DRB4X5D2U9 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DRB4X5D2U9 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DRB4X5D2U9 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms