Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.04■■□□□ 1.44
PCDHB1Q9Y5F3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHB1Q9Y5F3 AC026202.3-201ENST00000600805 1127 ntBASIC24.04■■□□□ 1.44
PCDHB1Q9Y5F3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHB1Q9Y5F3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHB1Q9Y5F3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHB1Q9Y5F3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHB1Q9Y5F3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHB1Q9Y5F3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.03■■□□□ 1.44
PCDHB1Q9Y5F3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHB1Q9Y5F3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHB1Q9Y5F3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHB1Q9Y5F3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHB1Q9Y5F3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.02■■□□□ 1.44
PCDHB1Q9Y5F3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHB1Q9Y5F3 MIR3960-201ENST00000583311 91 ntBASIC24.02■■□□□ 1.44
PCDHB1Q9Y5F3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.02■■□□□ 1.44
PCDHB1Q9Y5F3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHB1Q9Y5F3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.02■■□□□ 1.43
PCDHB1Q9Y5F3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
PCDHB1Q9Y5F3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHB1Q9Y5F3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHB1Q9Y5F3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHB1Q9Y5F3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.01■■□□□ 1.43
PCDHB1Q9Y5F3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHB1Q9Y5F3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
PCDHB1Q9Y5F3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHB1Q9Y5F3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHB1Q9Y5F3 AC010501.1-201ENST00000606270 1962 ntBASIC24■■□□□ 1.43
PCDHB1Q9Y5F3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHB1Q9Y5F3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHB1Q9Y5F3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHB1Q9Y5F3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHB1Q9Y5F3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHB1Q9Y5F3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.99■■□□□ 1.43
PCDHB1Q9Y5F3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHB1Q9Y5F3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHB1Q9Y5F3 DUX4L9-201ENST00000449051 1259 ntBASIC23.99■■□□□ 1.43
PCDHB1Q9Y5F3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
PCDHB1Q9Y5F3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.99■■□□□ 1.43
PCDHB1Q9Y5F3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHB1Q9Y5F3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.99■■□□□ 1.43
PCDHB1Q9Y5F3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHB1Q9Y5F3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHB1Q9Y5F3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHB1Q9Y5F3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.98■■□□□ 1.43
PCDHB1Q9Y5F3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.98■■□□□ 1.43
PCDHB1Q9Y5F3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.98■■□□□ 1.43
PCDHB1Q9Y5F3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.98■■□□□ 1.43
PCDHB1Q9Y5F3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHB1Q9Y5F3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHB1Q9Y5F3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHB1Q9Y5F3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHB1Q9Y5F3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHB1Q9Y5F3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.97■■□□□ 1.43
PCDHB1Q9Y5F3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.97■■□□□ 1.43
PCDHB1Q9Y5F3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
PCDHB1Q9Y5F3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.96■■□□□ 1.43
PCDHB1Q9Y5F3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHB1Q9Y5F3 AC010980.1-201ENST00000587192 1142 ntBASIC23.96■■□□□ 1.43
PCDHB1Q9Y5F3 BHLHE23-202ENST00000612929 1109 ntBASIC23.96■■□□□ 1.43
PCDHB1Q9Y5F3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.96■■□□□ 1.43
PCDHB1Q9Y5F3 ERN1-208ENST00000606895 2068 ntBASIC23.96■■□□□ 1.43
PCDHB1Q9Y5F3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHB1Q9Y5F3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.95■■□□□ 1.43
PCDHB1Q9Y5F3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.43
PCDHB1Q9Y5F3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
PCDHB1Q9Y5F3 KRT8P33-201ENST00000508125 1423 ntBASIC23.95■■□□□ 1.42
PCDHB1Q9Y5F3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
PCDHB1Q9Y5F3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHB1Q9Y5F3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHB1Q9Y5F3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHB1Q9Y5F3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHB1Q9Y5F3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHB1Q9Y5F3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHB1Q9Y5F3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHB1Q9Y5F3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.94■■□□□ 1.42
PCDHB1Q9Y5F3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.94■■□□□ 1.42
PCDHB1Q9Y5F3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHB1Q9Y5F3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
PCDHB1Q9Y5F3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.94■■□□□ 1.42
PCDHB1Q9Y5F3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
PCDHB1Q9Y5F3 RP9P-202ENST00000450133 1212 ntBASIC23.93■■□□□ 1.42
PCDHB1Q9Y5F3 SPCS2P3-201ENST00000500401 656 ntBASIC23.93■■□□□ 1.42
PCDHB1Q9Y5F3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHB1Q9Y5F3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.93■■□□□ 1.42
PCDHB1Q9Y5F3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
PCDHB1Q9Y5F3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHB1Q9Y5F3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHB1Q9Y5F3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHB1Q9Y5F3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHB1Q9Y5F3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHB1Q9Y5F3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHB1Q9Y5F3 AC093536.1-201ENST00000569153 554 ntBASIC23.92■■□□□ 1.42
PCDHB1Q9Y5F3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.92■■□□□ 1.42
PCDHB1Q9Y5F3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
PCDHB1Q9Y5F3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHB1Q9Y5F3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHB1Q9Y5F3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.91■■□□□ 1.42
PCDHB1Q9Y5F3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms