Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.6■□□□□ 0.89
C12orf4Q9NQ89 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.6■□□□□ 0.89
C12orf4Q9NQ89 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
C12orf4Q9NQ89 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
C12orf4Q9NQ89 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
C12orf4Q9NQ89 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.58■□□□□ 0.89
C12orf4Q9NQ89 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
C12orf4Q9NQ89 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
C12orf4Q9NQ89 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.58■□□□□ 0.89
C12orf4Q9NQ89 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.58■□□□□ 0.89
C12orf4Q9NQ89 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
C12orf4Q9NQ89 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
C12orf4Q9NQ89 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
C12orf4Q9NQ89 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
C12orf4Q9NQ89 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C12orf4Q9NQ89 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C12orf4Q9NQ89 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
C12orf4Q9NQ89 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C12orf4Q9NQ89 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
C12orf4Q9NQ89 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C12orf4Q9NQ89 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
C12orf4Q9NQ89 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C12orf4Q9NQ89 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
C12orf4Q9NQ89 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C12orf4Q9NQ89 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C12orf4Q9NQ89 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C12orf4Q9NQ89 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C12orf4Q9NQ89 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C12orf4Q9NQ89 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C12orf4Q9NQ89 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
C12orf4Q9NQ89 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
C12orf4Q9NQ89 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
C12orf4Q9NQ89 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C12orf4Q9NQ89 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.55■□□□□ 0.88
C12orf4Q9NQ89 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
C12orf4Q9NQ89 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
C12orf4Q9NQ89 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.55■□□□□ 0.88
C12orf4Q9NQ89 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C12orf4Q9NQ89 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C12orf4Q9NQ89 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C12orf4Q9NQ89 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.54■□□□□ 0.88
C12orf4Q9NQ89 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.54■□□□□ 0.88
C12orf4Q9NQ89 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
C12orf4Q9NQ89 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
C12orf4Q9NQ89 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
C12orf4Q9NQ89 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
C12orf4Q9NQ89 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C12orf4Q9NQ89 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
C12orf4Q9NQ89 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C12orf4Q9NQ89 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C12orf4Q9NQ89 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C12orf4Q9NQ89 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C12orf4Q9NQ89 AL024507.2-201ENST00000606070 2574 ntBASIC20.52■□□□□ 0.88
C12orf4Q9NQ89 AC010501.1-201ENST00000606270 1962 ntBASIC20.52■□□□□ 0.88
C12orf4Q9NQ89 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
C12orf4Q9NQ89 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C12orf4Q9NQ89 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
C12orf4Q9NQ89 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C12orf4Q9NQ89 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C12orf4Q9NQ89 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.52■□□□□ 0.88
C12orf4Q9NQ89 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.52■□□□□ 0.88
C12orf4Q9NQ89 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
C12orf4Q9NQ89 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
C12orf4Q9NQ89 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
C12orf4Q9NQ89 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C12orf4Q9NQ89 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.51■□□□□ 0.87
C12orf4Q9NQ89 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.51■□□□□ 0.87
C12orf4Q9NQ89 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
C12orf4Q9NQ89 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.51■□□□□ 0.87
C12orf4Q9NQ89 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
C12orf4Q9NQ89 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
C12orf4Q9NQ89 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
C12orf4Q9NQ89 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
C12orf4Q9NQ89 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.5■□□□□ 0.87
C12orf4Q9NQ89 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
C12orf4Q9NQ89 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
C12orf4Q9NQ89 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
C12orf4Q9NQ89 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.5■□□□□ 0.87
C12orf4Q9NQ89 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
C12orf4Q9NQ89 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
C12orf4Q9NQ89 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
C12orf4Q9NQ89 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
C12orf4Q9NQ89 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
C12orf4Q9NQ89 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C12orf4Q9NQ89 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.49■□□□□ 0.87
C12orf4Q9NQ89 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C12orf4Q9NQ89 LINC01971-201ENST00000617888 1048 ntBASIC20.49■□□□□ 0.87
C12orf4Q9NQ89 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
C12orf4Q9NQ89 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C12orf4Q9NQ89 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C12orf4Q9NQ89 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C12orf4Q9NQ89 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C12orf4Q9NQ89 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
C12orf4Q9NQ89 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
C12orf4Q9NQ89 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
C12orf4Q9NQ89 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
C12orf4Q9NQ89 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
C12orf4Q9NQ89 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.47■□□□□ 0.87
C12orf4Q9NQ89 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
C12orf4Q9NQ89 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms