Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AC022211.4-201ENST00000625094 2161 ntBASIC23.08■■□□□ 1.29
LRTM1Q9HBL6 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.08■■□□□ 1.28
LRTM1Q9HBL6 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
LRTM1Q9HBL6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LRTM1Q9HBL6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LRTM1Q9HBL6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.07■■□□□ 1.28
LRTM1Q9HBL6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LRTM1Q9HBL6 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
LRTM1Q9HBL6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LRTM1Q9HBL6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.06■■□□□ 1.28
LRTM1Q9HBL6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LRTM1Q9HBL6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.05■■□□□ 1.28
LRTM1Q9HBL6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
LRTM1Q9HBL6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LRTM1Q9HBL6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LRTM1Q9HBL6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
LRTM1Q9HBL6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
LRTM1Q9HBL6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LRTM1Q9HBL6 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LRTM1Q9HBL6 AL157400.5-201ENST00000507624 621 ntBASIC23.04■■□□□ 1.28
LRTM1Q9HBL6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LRTM1Q9HBL6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LRTM1Q9HBL6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LRTM1Q9HBL6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.03■■□□□ 1.28
LRTM1Q9HBL6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LRTM1Q9HBL6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.03■■□□□ 1.28
LRTM1Q9HBL6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LRTM1Q9HBL6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
LRTM1Q9HBL6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LRTM1Q9HBL6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LRTM1Q9HBL6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LRTM1Q9HBL6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LRTM1Q9HBL6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRTM1Q9HBL6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LRTM1Q9HBL6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LRTM1Q9HBL6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LRTM1Q9HBL6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRTM1Q9HBL6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRTM1Q9HBL6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRTM1Q9HBL6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRTM1Q9HBL6 AC138932.3-201ENST00000567634 1902 ntBASIC23.02■■□□□ 1.28
LRTM1Q9HBL6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.01■■□□□ 1.27
LRTM1Q9HBL6 AC093323.1-202ENST00000635031 2045 ntBASIC23.01■■□□□ 1.27
LRTM1Q9HBL6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRTM1Q9HBL6 AC060814.1-201ENST00000554326 538 ntBASIC23.01■■□□□ 1.27
LRTM1Q9HBL6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LRTM1Q9HBL6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.01■■□□□ 1.27
LRTM1Q9HBL6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRTM1Q9HBL6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRTM1Q9HBL6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRTM1Q9HBL6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
LRTM1Q9HBL6 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
LRTM1Q9HBL6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23■■□□□ 1.27
LRTM1Q9HBL6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23■■□□□ 1.27
LRTM1Q9HBL6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
LRTM1Q9HBL6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23■■□□□ 1.27
LRTM1Q9HBL6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23■■□□□ 1.27
LRTM1Q9HBL6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LRTM1Q9HBL6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LRTM1Q9HBL6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LRTM1Q9HBL6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
LRTM1Q9HBL6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.99■■□□□ 1.27
LRTM1Q9HBL6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.99■■□□□ 1.27
LRTM1Q9HBL6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.99■■□□□ 1.27
LRTM1Q9HBL6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LRTM1Q9HBL6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LRTM1Q9HBL6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.99■■□□□ 1.27
LRTM1Q9HBL6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.99■■□□□ 1.27
LRTM1Q9HBL6 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
LRTM1Q9HBL6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
LRTM1Q9HBL6 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.99■■□□□ 1.27
LRTM1Q9HBL6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.98■■□□□ 1.27
LRTM1Q9HBL6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.98■■□□□ 1.27
LRTM1Q9HBL6 AC025884.2-201ENST00000553429 711 ntBASIC22.98■■□□□ 1.27
LRTM1Q9HBL6 AC097639.1-201ENST00000565519 1891 ntBASIC22.98■■□□□ 1.27
LRTM1Q9HBL6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LRTM1Q9HBL6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LRTM1Q9HBL6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LRTM1Q9HBL6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LRTM1Q9HBL6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
LRTM1Q9HBL6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LRTM1Q9HBL6 MIR639-201ENST00000384974 98 ntBASIC22.96■■□□□ 1.27
LRTM1Q9HBL6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
LRTM1Q9HBL6 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
LRTM1Q9HBL6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LRTM1Q9HBL6 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LRTM1Q9HBL6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LRTM1Q9HBL6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LRTM1Q9HBL6 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
LRTM1Q9HBL6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.95■■□□□ 1.26
LRTM1Q9HBL6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.95■■□□□ 1.26
LRTM1Q9HBL6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
LRTM1Q9HBL6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
LRTM1Q9HBL6 MIR3960-201ENST00000583311 91 ntBASIC22.94■■□□□ 1.26
LRTM1Q9HBL6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LRTM1Q9HBL6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
LRTM1Q9HBL6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
LRTM1Q9HBL6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
LRTM1Q9HBL6 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
LRTM1Q9HBL6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms