Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
KRTAP3-1Q9BYR8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC12.2□□□□□ -0.46
KRTAP3-1Q9BYR8 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
KRTAP3-1Q9BYR8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KRTAP3-1Q9BYR8 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KRTAP3-1Q9BYR8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KRTAP3-1Q9BYR8 EED-207ENST00000528180 1745 ntTSL 5 BASIC12.2□□□□□ -0.46
KRTAP3-1Q9BYR8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KRTAP3-1Q9BYR8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KRTAP3-1Q9BYR8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KRTAP3-1Q9BYR8 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KRTAP3-1Q9BYR8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
KRTAP3-1Q9BYR8 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KRTAP3-1Q9BYR8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KRTAP3-1Q9BYR8 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KRTAP3-1Q9BYR8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC12.19□□□□□ -0.46
KRTAP3-1Q9BYR8 AL359504.2-201ENST00000605506 1601 ntBASIC12.19□□□□□ -0.46
KRTAP3-1Q9BYR8 SLC6A10P-202ENST00000431994 2058 ntBASIC12.18□□□□□ -0.46
KRTAP3-1Q9BYR8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
KRTAP3-1Q9BYR8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC12.18□□□□□ -0.46
KRTAP3-1Q9BYR8 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KRTAP3-1Q9BYR8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
KRTAP3-1Q9BYR8 DUX4L29-201ENST00000425409 679 ntBASIC12.18□□□□□ -0.46
KRTAP3-1Q9BYR8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC12.18□□□□□ -0.46
KRTAP3-1Q9BYR8 CHML-204ENST00000638121 920 ntTSL 2 BASIC12.18□□□□□ -0.46
KRTAP3-1Q9BYR8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KRTAP3-1Q9BYR8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KRTAP3-1Q9BYR8 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KRTAP3-1Q9BYR8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KRTAP3-1Q9BYR8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KRTAP3-1Q9BYR8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC12.17□□□□□ -0.46
KRTAP3-1Q9BYR8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KRTAP3-1Q9BYR8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KRTAP3-1Q9BYR8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
KRTAP3-1Q9BYR8 AP003733.4-201ENST00000623785 1697 ntBASIC12.17□□□□□ -0.46
KRTAP3-1Q9BYR8 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KRTAP3-1Q9BYR8 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KRTAP3-1Q9BYR8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KRTAP3-1Q9BYR8 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC12.17□□□□□ -0.46
KRTAP3-1Q9BYR8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC12.16□□□□□ -0.46
KRTAP3-1Q9BYR8 MIR219A2-201ENST00000608502 1504 ntBASIC12.16□□□□□ -0.46
KRTAP3-1Q9BYR8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-1Q9BYR8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
KRTAP3-1Q9BYR8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-1Q9BYR8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-1Q9BYR8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-1Q9BYR8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-1Q9BYR8 AC079416.2-201ENST00000625035 1193 ntBASIC12.16□□□□□ -0.46
KRTAP3-1Q9BYR8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-1Q9BYR8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-1Q9BYR8 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-1Q9BYR8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC12.16□□□□□ -0.46
KRTAP3-1Q9BYR8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-1Q9BYR8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-1Q9BYR8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-1Q9BYR8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP3-1Q9BYR8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP3-1Q9BYR8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP3-1Q9BYR8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP3-1Q9BYR8 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP3-1Q9BYR8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC12.15□□□□□ -0.46
KRTAP3-1Q9BYR8 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
KRTAP3-1Q9BYR8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP3-1Q9BYR8 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP3-1Q9BYR8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP3-1Q9BYR8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
KRTAP3-1Q9BYR8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
KRTAP3-1Q9BYR8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC12.15□□□□□ -0.46
KRTAP3-1Q9BYR8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC12.15□□□□□ -0.46
KRTAP3-1Q9BYR8 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
KRTAP3-1Q9BYR8 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP3-1Q9BYR8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC12.15□□□□□ -0.46
KRTAP3-1Q9BYR8 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP3-1Q9BYR8 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP3-1Q9BYR8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
KRTAP3-1Q9BYR8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP3-1Q9BYR8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP3-1Q9BYR8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
KRTAP3-1Q9BYR8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
KRTAP3-1Q9BYR8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP3-1Q9BYR8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC12.14□□□□□ -0.47
KRTAP3-1Q9BYR8 AC148477.6-201ENST00000623746 465 ntBASIC12.14□□□□□ -0.47
KRTAP3-1Q9BYR8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP3-1Q9BYR8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
KRTAP3-1Q9BYR8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP3-1Q9BYR8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
KRTAP3-1Q9BYR8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP3-1Q9BYR8 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP3-1Q9BYR8 LINC00543-201ENST00000567234 1845 ntBASIC12.14□□□□□ -0.47
KRTAP3-1Q9BYR8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC12.13□□□□□ -0.47
KRTAP3-1Q9BYR8 AL359258.2-201ENST00000564063 1566 ntBASIC12.13□□□□□ -0.47
KRTAP3-1Q9BYR8 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
KRTAP3-1Q9BYR8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
KRTAP3-1Q9BYR8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC12.13□□□□□ -0.47
KRTAP3-1Q9BYR8 AC097639.1-201ENST00000565519 1891 ntBASIC12.13□□□□□ -0.47
KRTAP3-1Q9BYR8 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
KRTAP3-1Q9BYR8 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC12.13□□□□□ -0.47
KRTAP3-1Q9BYR8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC12.13□□□□□ -0.47
KRTAP3-1Q9BYR8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
KRTAP3-1Q9BYR8 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms