Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.71■□□□□ 0.59
TRGV9Q99603 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.71■□□□□ 0.59
TRGV9Q99603 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TRGV9Q99603 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRGV9Q99603 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRGV9Q99603 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRGV9Q99603 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.7■□□□□ 0.58
TRGV9Q99603 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
TRGV9Q99603 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRGV9Q99603 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRGV9Q99603 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.7■□□□□ 0.58
TRGV9Q99603 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRGV9Q99603 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRGV9Q99603 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRGV9Q99603 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.69■□□□□ 0.58
TRGV9Q99603 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.69■□□□□ 0.58
TRGV9Q99603 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRGV9Q99603 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.69■□□□□ 0.58
TRGV9Q99603 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRGV9Q99603 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TRGV9Q99603 AC097639.1-201ENST00000565519 1891 ntBASIC18.67■□□□□ 0.58
TRGV9Q99603 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.67■□□□□ 0.58
TRGV9Q99603 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.67■□□□□ 0.58
TRGV9Q99603 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRGV9Q99603 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TRGV9Q99603 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRGV9Q99603 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRGV9Q99603 CR559946.2-201ENST00000623684 991 ntBASIC18.67■□□□□ 0.58
TRGV9Q99603 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TRGV9Q99603 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRGV9Q99603 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRGV9Q99603 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRGV9Q99603 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRGV9Q99603 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRGV9Q99603 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
TRGV9Q99603 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRGV9Q99603 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRGV9Q99603 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRGV9Q99603 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRGV9Q99603 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRGV9Q99603 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRGV9Q99603 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRGV9Q99603 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRGV9Q99603 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRGV9Q99603 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRGV9Q99603 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRGV9Q99603 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRGV9Q99603 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRGV9Q99603 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.65■□□□□ 0.58
TRGV9Q99603 AP003733.4-201ENST00000623785 1697 ntBASIC18.65■□□□□ 0.58
TRGV9Q99603 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.65■□□□□ 0.58
TRGV9Q99603 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TRGV9Q99603 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.65■□□□□ 0.58
TRGV9Q99603 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRGV9Q99603 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
TRGV9Q99603 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRGV9Q99603 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.64■□□□□ 0.57
TRGV9Q99603 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRGV9Q99603 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRGV9Q99603 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TRGV9Q99603 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.63■□□□□ 0.57
TRGV9Q99603 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.62■□□□□ 0.57
TRGV9Q99603 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRGV9Q99603 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRGV9Q99603 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TRGV9Q99603 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRGV9Q99603 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRGV9Q99603 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRGV9Q99603 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRGV9Q99603 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRGV9Q99603 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRGV9Q99603 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRGV9Q99603 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.61■□□□□ 0.57
TRGV9Q99603 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRGV9Q99603 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.61■□□□□ 0.57
TRGV9Q99603 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.61■□□□□ 0.57
TRGV9Q99603 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRGV9Q99603 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.61■□□□□ 0.57
TRGV9Q99603 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRGV9Q99603 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRGV9Q99603 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRGV9Q99603 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRGV9Q99603 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRGV9Q99603 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRGV9Q99603 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.6■□□□□ 0.57
TRGV9Q99603 MIR3648-2-201ENST00000581792 180 ntBASIC18.6■□□□□ 0.57
TRGV9Q99603 MIR3648-1-201ENST00000615959 180 ntBASIC18.6■□□□□ 0.57
TRGV9Q99603 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.6■□□□□ 0.57
TRGV9Q99603 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRGV9Q99603 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TRGV9Q99603 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.6■□□□□ 0.57
TRGV9Q99603 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.59■□□□□ 0.57
TRGV9Q99603 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.59■□□□□ 0.57
TRGV9Q99603 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRGV9Q99603 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRGV9Q99603 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRGV9Q99603 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRGV9Q99603 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.58■□□□□ 0.56
TRGV9Q99603 SLC6A10P-202ENST00000431994 2058 ntBASIC18.58■□□□□ 0.56
TRGV9Q99603 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms