Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
CDK5RAP1Q96SZ6 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.07■■□□□ 1.6
CDK5RAP1Q96SZ6 AC010980.1-201ENST00000587192 1142 ntBASIC25.07■■□□□ 1.6
CDK5RAP1Q96SZ6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CDK5RAP1Q96SZ6 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CDK5RAP1Q96SZ6 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.06■■□□□ 1.6
CDK5RAP1Q96SZ6 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CDK5RAP1Q96SZ6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDK5RAP1Q96SZ6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.06■■□□□ 1.6
CDK5RAP1Q96SZ6 AL121749.1-202ENST00000609313 2153 ntBASIC25.05■■□□□ 1.6
CDK5RAP1Q96SZ6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CDK5RAP1Q96SZ6 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CDK5RAP1Q96SZ6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDK5RAP1Q96SZ6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDK5RAP1Q96SZ6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC25.04■■□□□ 1.6
CDK5RAP1Q96SZ6 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC25.04■■□□□ 1.6
CDK5RAP1Q96SZ6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDK5RAP1Q96SZ6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
CDK5RAP1Q96SZ6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDK5RAP1Q96SZ6 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.03■■□□□ 1.6
CDK5RAP1Q96SZ6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CDK5RAP1Q96SZ6 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.03■■□□□ 1.6
CDK5RAP1Q96SZ6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.03■■□□□ 1.6
CDK5RAP1Q96SZ6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CDK5RAP1Q96SZ6 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CDK5RAP1Q96SZ6 IDNK-201ENST00000376417 511 ntTSL 5 BASIC25.02■■□□□ 1.6
CDK5RAP1Q96SZ6 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CDK5RAP1Q96SZ6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.02■■□□□ 1.6
CDK5RAP1Q96SZ6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CDK5RAP1Q96SZ6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDK5RAP1Q96SZ6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.01■■□□□ 1.59
CDK5RAP1Q96SZ6 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.01■■□□□ 1.59
CDK5RAP1Q96SZ6 LONRF2P2-201ENST00000439212 571 ntBASIC25.01■■□□□ 1.59
CDK5RAP1Q96SZ6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25■■□□□ 1.59
CDK5RAP1Q96SZ6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
CDK5RAP1Q96SZ6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25■■□□□ 1.59
CDK5RAP1Q96SZ6 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25■■□□□ 1.59
CDK5RAP1Q96SZ6 RARRES2P1-201ENST00000474487 481 ntBASIC25■■□□□ 1.59
CDK5RAP1Q96SZ6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CDK5RAP1Q96SZ6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
CDK5RAP1Q96SZ6 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
CDK5RAP1Q96SZ6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25■■□□□ 1.59
CDK5RAP1Q96SZ6 YBX1P4-201ENST00000392794 808 ntBASIC24.99■■□□□ 1.59
CDK5RAP1Q96SZ6 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CDK5RAP1Q96SZ6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CDK5RAP1Q96SZ6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CDK5RAP1Q96SZ6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC24.99■■□□□ 1.59
CDK5RAP1Q96SZ6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDK5RAP1Q96SZ6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.98■■□□□ 1.59
CDK5RAP1Q96SZ6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
CDK5RAP1Q96SZ6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDK5RAP1Q96SZ6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDK5RAP1Q96SZ6 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.98■■□□□ 1.59
CDK5RAP1Q96SZ6 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.98■■□□□ 1.59
CDK5RAP1Q96SZ6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CDK5RAP1Q96SZ6 MIR4508-201ENST00000584178 70 ntBASIC24.98■■□□□ 1.59
CDK5RAP1Q96SZ6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC24.98■■□□□ 1.59
CDK5RAP1Q96SZ6 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDK5RAP1Q96SZ6 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.98■■□□□ 1.59
CDK5RAP1Q96SZ6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.97■■□□□ 1.59
CDK5RAP1Q96SZ6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.97■■□□□ 1.59
CDK5RAP1Q96SZ6 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
CDK5RAP1Q96SZ6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CDK5RAP1Q96SZ6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.96■■□□□ 1.59
CDK5RAP1Q96SZ6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
CDK5RAP1Q96SZ6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDK5RAP1Q96SZ6 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDK5RAP1Q96SZ6 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.96■■□□□ 1.59
CDK5RAP1Q96SZ6 PVT1_1.1-201ENST00000615125 194 ntBASIC24.96■■□□□ 1.59
CDK5RAP1Q96SZ6 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDK5RAP1Q96SZ6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDK5RAP1Q96SZ6 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CDK5RAP1Q96SZ6 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDK5RAP1Q96SZ6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.96■■□□□ 1.59
CDK5RAP1Q96SZ6 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDK5RAP1Q96SZ6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDK5RAP1Q96SZ6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CDK5RAP1Q96SZ6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CDK5RAP1Q96SZ6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.94■■□□□ 1.58
CDK5RAP1Q96SZ6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CDK5RAP1Q96SZ6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CDK5RAP1Q96SZ6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.94■■□□□ 1.58
CDK5RAP1Q96SZ6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CDK5RAP1Q96SZ6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.94■■□□□ 1.58
CDK5RAP1Q96SZ6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CDK5RAP1Q96SZ6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CDK5RAP1Q96SZ6 AC022616.5-201ENST00000518796 181 ntBASIC24.93■■□□□ 1.58
CDK5RAP1Q96SZ6 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CDK5RAP1Q96SZ6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CDK5RAP1Q96SZ6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.93■■□□□ 1.58
CDK5RAP1Q96SZ6 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.93■■□□□ 1.58
CDK5RAP1Q96SZ6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDK5RAP1Q96SZ6 KRT8P33-201ENST00000508125 1423 ntBASIC24.92■■□□□ 1.58
CDK5RAP1Q96SZ6 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.92■■□□□ 1.58
CDK5RAP1Q96SZ6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDK5RAP1Q96SZ6 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CDK5RAP1Q96SZ6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.91■■□□□ 1.58
CDK5RAP1Q96SZ6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
CDK5RAP1Q96SZ6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
CDK5RAP1Q96SZ6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms