Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.54■■□□□ 1.2
SLC47A1Q96FL8 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC47A1Q96FL8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SLC47A1Q96FL8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC47A1Q96FL8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SLC47A1Q96FL8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SLC47A1Q96FL8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SLC47A1Q96FL8 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.53■■□□□ 1.2
SLC47A1Q96FL8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.53■■□□□ 1.2
SLC47A1Q96FL8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SLC47A1Q96FL8 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SLC47A1Q96FL8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SLC47A1Q96FL8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SLC47A1Q96FL8 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SLC47A1Q96FL8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.52■■□□□ 1.2
SLC47A1Q96FL8 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.52■■□□□ 1.2
SLC47A1Q96FL8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.52■■□□□ 1.2
SLC47A1Q96FL8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SLC47A1Q96FL8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.19
SLC47A1Q96FL8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.51■■□□□ 1.19
SLC47A1Q96FL8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.51■■□□□ 1.19
SLC47A1Q96FL8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SLC47A1Q96FL8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SLC47A1Q96FL8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.51■■□□□ 1.19
SLC47A1Q96FL8 AC148477.6-201ENST00000623746 465 ntBASIC22.51■■□□□ 1.19
SLC47A1Q96FL8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SLC47A1Q96FL8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
SLC47A1Q96FL8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SLC47A1Q96FL8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SLC47A1Q96FL8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.51■■□□□ 1.19
SLC47A1Q96FL8 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.5■■□□□ 1.19
SLC47A1Q96FL8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SLC47A1Q96FL8 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SLC47A1Q96FL8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SLC47A1Q96FL8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.5■■□□□ 1.19
SLC47A1Q96FL8 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SLC47A1Q96FL8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SLC47A1Q96FL8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.5■■□□□ 1.19
SLC47A1Q96FL8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SLC47A1Q96FL8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
SLC47A1Q96FL8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22.49■■□□□ 1.19
SLC47A1Q96FL8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.49■■□□□ 1.19
SLC47A1Q96FL8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SLC47A1Q96FL8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.49■■□□□ 1.19
SLC47A1Q96FL8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SLC47A1Q96FL8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SLC47A1Q96FL8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SLC47A1Q96FL8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SLC47A1Q96FL8 MIR219A2-201ENST00000608502 1504 ntBASIC22.48■■□□□ 1.19
SLC47A1Q96FL8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SLC47A1Q96FL8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.48■■□□□ 1.19
SLC47A1Q96FL8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SLC47A1Q96FL8 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SLC47A1Q96FL8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SLC47A1Q96FL8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SLC47A1Q96FL8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SLC47A1Q96FL8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SLC47A1Q96FL8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.47■■□□□ 1.19
SLC47A1Q96FL8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
SLC47A1Q96FL8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SLC47A1Q96FL8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
SLC47A1Q96FL8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SLC47A1Q96FL8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.47■■□□□ 1.19
SLC47A1Q96FL8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SLC47A1Q96FL8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SLC47A1Q96FL8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SLC47A1Q96FL8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SLC47A1Q96FL8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SLC47A1Q96FL8 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.45■■□□□ 1.18
SLC47A1Q96FL8 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SLC47A1Q96FL8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SLC47A1Q96FL8 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SLC47A1Q96FL8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SLC47A1Q96FL8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
SLC47A1Q96FL8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SLC47A1Q96FL8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
SLC47A1Q96FL8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SLC47A1Q96FL8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
SLC47A1Q96FL8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SLC47A1Q96FL8 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SLC47A1Q96FL8 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SLC47A1Q96FL8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.44■■□□□ 1.18
SLC47A1Q96FL8 HLA-V-202ENST00000446817 847 ntBASIC22.44■■□□□ 1.18
SLC47A1Q96FL8 CR559946.2-201ENST00000623684 991 ntBASIC22.44■■□□□ 1.18
SLC47A1Q96FL8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SLC47A1Q96FL8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.43■■□□□ 1.18
SLC47A1Q96FL8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.43■■□□□ 1.18
SLC47A1Q96FL8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
SLC47A1Q96FL8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SLC47A1Q96FL8 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SLC47A1Q96FL8 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SLC47A1Q96FL8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SLC47A1Q96FL8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
SLC47A1Q96FL8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SLC47A1Q96FL8 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SLC47A1Q96FL8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
SLC47A1Q96FL8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
SLC47A1Q96FL8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.42■■□□□ 1.18
SLC47A1Q96FL8 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SLC47A1Q96FL8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms