Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 HLA-V-202ENST00000446817 847 ntBASIC20.76■□□□□ 0.91
FOXRED1Q96CU9 MIR219A2-201ENST00000608502 1504 ntBASIC20.76■□□□□ 0.91
FOXRED1Q96CU9 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
FOXRED1Q96CU9 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXRED1Q96CU9 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXRED1Q96CU9 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXRED1Q96CU9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.75■□□□□ 0.91
FOXRED1Q96CU9 MIR3648-2-201ENST00000581792 180 ntBASIC20.75■□□□□ 0.91
FOXRED1Q96CU9 MIR3648-1-201ENST00000615959 180 ntBASIC20.75■□□□□ 0.91
FOXRED1Q96CU9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.75■□□□□ 0.91
FOXRED1Q96CU9 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXRED1Q96CU9 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXRED1Q96CU9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
FOXRED1Q96CU9 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.75■□□□□ 0.91
FOXRED1Q96CU9 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.75■□□□□ 0.91
FOXRED1Q96CU9 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXRED1Q96CU9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.74■□□□□ 0.91
FOXRED1Q96CU9 CR559946.2-201ENST00000623684 991 ntBASIC20.74■□□□□ 0.91
FOXRED1Q96CU9 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.74■□□□□ 0.91
FOXRED1Q96CU9 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXRED1Q96CU9 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.73■□□□□ 0.91
FOXRED1Q96CU9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.73■□□□□ 0.91
FOXRED1Q96CU9 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
FOXRED1Q96CU9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FOXRED1Q96CU9 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.73■□□□□ 0.91
FOXRED1Q96CU9 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXRED1Q96CU9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXRED1Q96CU9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.73■□□□□ 0.91
FOXRED1Q96CU9 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXRED1Q96CU9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXRED1Q96CU9 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.72■□□□□ 0.91
FOXRED1Q96CU9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXRED1Q96CU9 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXRED1Q96CU9 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.72■□□□□ 0.91
FOXRED1Q96CU9 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.71■□□□□ 0.91
FOXRED1Q96CU9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.71■□□□□ 0.91
FOXRED1Q96CU9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXRED1Q96CU9 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.71■□□□□ 0.91
FOXRED1Q96CU9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
FOXRED1Q96CU9 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.71■□□□□ 0.91
FOXRED1Q96CU9 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
FOXRED1Q96CU9 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXRED1Q96CU9 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.7■□□□□ 0.9
FOXRED1Q96CU9 AC016575.1-201ENST00000607026 382 ntBASIC20.7■□□□□ 0.9
FOXRED1Q96CU9 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXRED1Q96CU9 AL359258.2-201ENST00000564063 1566 ntBASIC20.7■□□□□ 0.9
FOXRED1Q96CU9 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXRED1Q96CU9 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXRED1Q96CU9 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXRED1Q96CU9 AP003733.4-201ENST00000623785 1697 ntBASIC20.7■□□□□ 0.9
FOXRED1Q96CU9 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXRED1Q96CU9 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXRED1Q96CU9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FOXRED1Q96CU9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FOXRED1Q96CU9 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXRED1Q96CU9 AL359504.2-201ENST00000605506 1601 ntBASIC20.69■□□□□ 0.9
FOXRED1Q96CU9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.69■□□□□ 0.9
FOXRED1Q96CU9 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXRED1Q96CU9 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
FOXRED1Q96CU9 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXRED1Q96CU9 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXRED1Q96CU9 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXRED1Q96CU9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXRED1Q96CU9 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.69■□□□□ 0.9
FOXRED1Q96CU9 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXRED1Q96CU9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
FOXRED1Q96CU9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXRED1Q96CU9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.68■□□□□ 0.9
FOXRED1Q96CU9 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXRED1Q96CU9 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXRED1Q96CU9 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXRED1Q96CU9 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXRED1Q96CU9 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXRED1Q96CU9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXRED1Q96CU9 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXRED1Q96CU9 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXRED1Q96CU9 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXRED1Q96CU9 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXRED1Q96CU9 MIR639-201ENST00000384974 98 ntBASIC20.67■□□□□ 0.9
FOXRED1Q96CU9 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FOXRED1Q96CU9 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXRED1Q96CU9 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FOXRED1Q96CU9 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXRED1Q96CU9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXRED1Q96CU9 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXRED1Q96CU9 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXRED1Q96CU9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXRED1Q96CU9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FOXRED1Q96CU9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXRED1Q96CU9 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXRED1Q96CU9 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.66■□□□□ 0.9
FOXRED1Q96CU9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXRED1Q96CU9 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXRED1Q96CU9 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXRED1Q96CU9 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXRED1Q96CU9 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXRED1Q96CU9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXRED1Q96CU9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXRED1Q96CU9 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXRED1Q96CU9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms