Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC36.63■■■■□ 3.45
ARHGEF40Q8TER5 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC36.63■■■■□ 3.45
ARHGEF40Q8TER5 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC36.63■■■■□ 3.45
ARHGEF40Q8TER5 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
ARHGEF40Q8TER5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC36.62■■■■□ 3.45
ARHGEF40Q8TER5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC36.62■■■■□ 3.45
ARHGEF40Q8TER5 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
ARHGEF40Q8TER5 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC36.61■■■■□ 3.45
ARHGEF40Q8TER5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC36.61■■■■□ 3.45
ARHGEF40Q8TER5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC36.61■■■■□ 3.45
ARHGEF40Q8TER5 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
ARHGEF40Q8TER5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC36.6■■■■□ 3.45
ARHGEF40Q8TER5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC36.6■■■■□ 3.45
ARHGEF40Q8TER5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC36.6■■■■□ 3.45
ARHGEF40Q8TER5 MTDHP2-201ENST00000601468 714 ntBASIC36.6■■■■□ 3.45
ARHGEF40Q8TER5 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC36.59■■■■□ 3.45
ARHGEF40Q8TER5 LSM4-201ENST00000252816 986 ntTSL 2 BASIC36.59■■■■□ 3.45
ARHGEF40Q8TER5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC36.58■■■■□ 3.45
ARHGEF40Q8TER5 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC36.58■■■■□ 3.45
ARHGEF40Q8TER5 AC010997.5-201ENST00000609182 354 ntBASIC36.58■■■■□ 3.45
ARHGEF40Q8TER5 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC36.57■■■■□ 3.44
ARHGEF40Q8TER5 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC36.57■■■■□ 3.44
ARHGEF40Q8TER5 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC36.57■■■■□ 3.44
ARHGEF40Q8TER5 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC36.56■■■■□ 3.44
ARHGEF40Q8TER5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC36.56■■■■□ 3.44
ARHGEF40Q8TER5 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC36.56■■■■□ 3.44
ARHGEF40Q8TER5 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC36.56■■■■□ 3.44
ARHGEF40Q8TER5 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC36.56■■■■□ 3.44
ARHGEF40Q8TER5 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC36.56■■■■□ 3.44
ARHGEF40Q8TER5 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC36.55■■■■□ 3.44
ARHGEF40Q8TER5 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC36.55■■■■□ 3.44
ARHGEF40Q8TER5 AC135279.3-201ENST00000610945 1311 ntBASIC36.55■■■■□ 3.44
ARHGEF40Q8TER5 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC36.54■■■■□ 3.44
ARHGEF40Q8TER5 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC36.54■■■■□ 3.44
ARHGEF40Q8TER5 ABCB10P3-201ENST00000561950 2166 ntBASIC36.53■■■■□ 3.44
ARHGEF40Q8TER5 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC36.53■■■■□ 3.44
ARHGEF40Q8TER5 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC36.53■■■■□ 3.44
ARHGEF40Q8TER5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC36.53■■■■□ 3.44
ARHGEF40Q8TER5 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC36.52■■■■□ 3.44
ARHGEF40Q8TER5 RASSF1-AS1-201ENST00000629828 790 ntBASIC36.52■■■■□ 3.44
ARHGEF40Q8TER5 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC36.51■■■■□ 3.44
ARHGEF40Q8TER5 KRT18P10-201ENST00000388836 1287 ntBASIC36.51■■■■□ 3.44
ARHGEF40Q8TER5 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.44
ARHGEF40Q8TER5 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC36.51■■■■□ 3.43
ARHGEF40Q8TER5 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC36.5■■■■□ 3.43
ARHGEF40Q8TER5 LGR4-203ENST00000480977 492 ntTSL 2 BASIC36.5■■■■□ 3.43
ARHGEF40Q8TER5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC36.5■■■■□ 3.43
ARHGEF40Q8TER5 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC36.49■■■■□ 3.43
ARHGEF40Q8TER5 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC36.49■■■■□ 3.43
ARHGEF40Q8TER5 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC36.49■■■■□ 3.43
ARHGEF40Q8TER5 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC36.49■■■■□ 3.43
ARHGEF40Q8TER5 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC36.48■■■■□ 3.43
ARHGEF40Q8TER5 AL031432.3-201ENST00000607698 485 ntBASIC36.48■■■■□ 3.43
ARHGEF40Q8TER5 MIR5787-201ENST00000611784 55 ntBASIC36.48■■■■□ 3.43
ARHGEF40Q8TER5 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC36.48■■■■□ 3.43
ARHGEF40Q8TER5 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC36.47■■■■□ 3.43
ARHGEF40Q8TER5 AC106739.1-201ENST00000617035 715 ntBASIC36.47■■■■□ 3.43
ARHGEF40Q8TER5 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC36.47■■■■□ 3.43
ARHGEF40Q8TER5 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC36.47■■■■□ 3.43
ARHGEF40Q8TER5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC36.46■■■■□ 3.43
ARHGEF40Q8TER5 AL356740.2-201ENST00000601559 647 ntBASIC36.46■■■■□ 3.43
ARHGEF40Q8TER5 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC36.46■■■■□ 3.43
ARHGEF40Q8TER5 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
ARHGEF40Q8TER5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC36.45■■■■□ 3.43
ARHGEF40Q8TER5 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC36.45■■■■□ 3.43
ARHGEF40Q8TER5 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC36.44■■■■□ 3.42
ARHGEF40Q8TER5 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC36.44■■■■□ 3.42
ARHGEF40Q8TER5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC36.44■■■■□ 3.42
ARHGEF40Q8TER5 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC36.44■■■■□ 3.42
ARHGEF40Q8TER5 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC36.44■■■■□ 3.42
ARHGEF40Q8TER5 EXOG-217ENST00000630638 197 ntTSL 5 BASIC36.44■■■■□ 3.42
ARHGEF40Q8TER5 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC36.44■■■■□ 3.42
ARHGEF40Q8TER5 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC36.43■■■■□ 3.42
ARHGEF40Q8TER5 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
ARHGEF40Q8TER5 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC36.43■■■■□ 3.42
ARHGEF40Q8TER5 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
ARHGEF40Q8TER5 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
ARHGEF40Q8TER5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC36.43■■■■□ 3.42
ARHGEF40Q8TER5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC36.43■■■■□ 3.42
ARHGEF40Q8TER5 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC36.42■■■■□ 3.42
ARHGEF40Q8TER5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC36.42■■■■□ 3.42
ARHGEF40Q8TER5 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC36.42■■■■□ 3.42
ARHGEF40Q8TER5 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC36.42■■■■□ 3.42
ARHGEF40Q8TER5 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC36.4■■■■□ 3.42
ARHGEF40Q8TER5 AC142381.2-201ENST00000566120 298 ntBASIC36.39■■■■□ 3.42
ARHGEF40Q8TER5 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC36.39■■■■□ 3.42
ARHGEF40Q8TER5 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC36.39■■■■□ 3.42
ARHGEF40Q8TER5 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC36.39■■■■□ 3.42
ARHGEF40Q8TER5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC36.39■■■■□ 3.42
ARHGEF40Q8TER5 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
ARHGEF40Q8TER5 SUDS3P1-201ENST00000505831 966 ntBASIC36.38■■■■□ 3.41
ARHGEF40Q8TER5 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC36.38■■■■□ 3.41
ARHGEF40Q8TER5 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC36.38■■■■□ 3.41
ARHGEF40Q8TER5 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
ARHGEF40Q8TER5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC36.37■■■■□ 3.41
ARHGEF40Q8TER5 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
ARHGEF40Q8TER5 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
ARHGEF40Q8TER5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC36.37■■■■□ 3.41
ARHGEF40Q8TER5 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC36.35■■■■□ 3.41
ARHGEF40Q8TER5 AK3-203ENST00000447596 705 ntTSL 2 BASIC36.35■■■■□ 3.41
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms