Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BBS1Q8NFJ9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.55■■□□□ 1.04
BBS1Q8NFJ9 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.55■■□□□ 1.04
BBS1Q8NFJ9 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BBS1Q8NFJ9 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.55■■□□□ 1.04
BBS1Q8NFJ9 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.55■■□□□ 1.04
BBS1Q8NFJ9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.55■■□□□ 1.04
BBS1Q8NFJ9 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BBS1Q8NFJ9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BBS1Q8NFJ9 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BBS1Q8NFJ9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BBS1Q8NFJ9 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.55■■□□□ 1.04
BBS1Q8NFJ9 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
BBS1Q8NFJ9 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BBS1Q8NFJ9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.54■■□□□ 1.04
BBS1Q8NFJ9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BBS1Q8NFJ9 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.54■■□□□ 1.04
BBS1Q8NFJ9 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.54■■□□□ 1.04
BBS1Q8NFJ9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BBS1Q8NFJ9 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.53■■□□□ 1.04
BBS1Q8NFJ9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BBS1Q8NFJ9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.53■■□□□ 1.04
BBS1Q8NFJ9 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.53■■□□□ 1.04
BBS1Q8NFJ9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.53■■□□□ 1.04
BBS1Q8NFJ9 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BBS1Q8NFJ9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
BBS1Q8NFJ9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
BBS1Q8NFJ9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
BBS1Q8NFJ9 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
BBS1Q8NFJ9 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
BBS1Q8NFJ9 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
BBS1Q8NFJ9 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
BBS1Q8NFJ9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
BBS1Q8NFJ9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
BBS1Q8NFJ9 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
BBS1Q8NFJ9 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BBS1Q8NFJ9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
BBS1Q8NFJ9 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BBS1Q8NFJ9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BBS1Q8NFJ9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BBS1Q8NFJ9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BBS1Q8NFJ9 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BBS1Q8NFJ9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BBS1Q8NFJ9 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
BBS1Q8NFJ9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
BBS1Q8NFJ9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
BBS1Q8NFJ9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
BBS1Q8NFJ9 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
BBS1Q8NFJ9 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.5■■□□□ 1.03
BBS1Q8NFJ9 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.5■■□□□ 1.03
BBS1Q8NFJ9 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
BBS1Q8NFJ9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
BBS1Q8NFJ9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
BBS1Q8NFJ9 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BBS1Q8NFJ9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BBS1Q8NFJ9 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
BBS1Q8NFJ9 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BBS1Q8NFJ9 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.48■■□□□ 1.03
BBS1Q8NFJ9 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
BBS1Q8NFJ9 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BBS1Q8NFJ9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BBS1Q8NFJ9 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.48■■□□□ 1.03
BBS1Q8NFJ9 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BBS1Q8NFJ9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BBS1Q8NFJ9 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BBS1Q8NFJ9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BBS1Q8NFJ9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
BBS1Q8NFJ9 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.47■■□□□ 1.03
BBS1Q8NFJ9 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
BBS1Q8NFJ9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.47■■□□□ 1.03
BBS1Q8NFJ9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
BBS1Q8NFJ9 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BBS1Q8NFJ9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.46■■□□□ 1.03
BBS1Q8NFJ9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.46■■□□□ 1.03
BBS1Q8NFJ9 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BBS1Q8NFJ9 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.46■■□□□ 1.03
BBS1Q8NFJ9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.46■■□□□ 1.03
BBS1Q8NFJ9 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BBS1Q8NFJ9 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
BBS1Q8NFJ9 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BBS1Q8NFJ9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.45■■□□□ 1.02
BBS1Q8NFJ9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BBS1Q8NFJ9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BBS1Q8NFJ9 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
BBS1Q8NFJ9 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
BBS1Q8NFJ9 LINC01124-201ENST00000409786 2117 ntBASIC21.44■■□□□ 1.02
BBS1Q8NFJ9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
BBS1Q8NFJ9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
BBS1Q8NFJ9 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
BBS1Q8NFJ9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
BBS1Q8NFJ9 ZNRF2P2-203ENST00000454624 420 ntBASIC21.44■■□□□ 1.02
BBS1Q8NFJ9 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
BBS1Q8NFJ9 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
BBS1Q8NFJ9 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
BBS1Q8NFJ9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.43■■□□□ 1.02
BBS1Q8NFJ9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.43■■□□□ 1.02
BBS1Q8NFJ9 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
BBS1Q8NFJ9 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
BBS1Q8NFJ9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
BBS1Q8NFJ9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms