Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
DDX60Q8IY21 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
DDX60Q8IY21 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
DDX60Q8IY21 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
DDX60Q8IY21 LONRF2P2-201ENST00000439212 571 ntBASIC30.18■■■□□ 2.42
DDX60Q8IY21 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC30.18■■■□□ 2.42
DDX60Q8IY21 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
DDX60Q8IY21 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
DDX60Q8IY21 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC30.17■■■□□ 2.42
DDX60Q8IY21 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
DDX60Q8IY21 RNF146-205ENST00000477776 762 ntTSL 3 BASIC30.16■■■□□ 2.42
DDX60Q8IY21 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
DDX60Q8IY21 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
DDX60Q8IY21 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC30.16■■■□□ 2.42
DDX60Q8IY21 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
DDX60Q8IY21 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
DDX60Q8IY21 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
DDX60Q8IY21 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC30.15■■■□□ 2.42
DDX60Q8IY21 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC30.15■■■□□ 2.42
DDX60Q8IY21 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC30.14■■■□□ 2.42
DDX60Q8IY21 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC30.14■■■□□ 2.42
DDX60Q8IY21 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC30.14■■■□□ 2.42
DDX60Q8IY21 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
DDX60Q8IY21 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
DDX60Q8IY21 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC30.13■■■□□ 2.41
DDX60Q8IY21 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
DDX60Q8IY21 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
DDX60Q8IY21 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
DDX60Q8IY21 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
DDX60Q8IY21 AC131212.1-201ENST00000613771 668 ntBASIC30.13■■■□□ 2.41
DDX60Q8IY21 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
DDX60Q8IY21 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
DDX60Q8IY21 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC30.11■■■□□ 2.41
DDX60Q8IY21 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
DDX60Q8IY21 AC142086.6-201ENST00000621154 1765 ntBASIC30.1■■■□□ 2.41
DDX60Q8IY21 AP004609.3-201ENST00000610705 1884 ntBASIC30.1■■■□□ 2.41
DDX60Q8IY21 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
DDX60Q8IY21 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.1■■■□□ 2.41
DDX60Q8IY21 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
DDX60Q8IY21 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
DDX60Q8IY21 Z92544.1-202ENST00000571933 1220 ntBASIC30.1■■■□□ 2.41
DDX60Q8IY21 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
DDX60Q8IY21 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC30.09■■■□□ 2.41
DDX60Q8IY21 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
DDX60Q8IY21 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC30.09■■■□□ 2.41
DDX60Q8IY21 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC30.09■■■□□ 2.41
DDX60Q8IY21 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC30.09■■■□□ 2.41
DDX60Q8IY21 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC30.09■■■□□ 2.41
DDX60Q8IY21 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
DDX60Q8IY21 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
DDX60Q8IY21 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
DDX60Q8IY21 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC30.08■■■□□ 2.41
DDX60Q8IY21 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
DDX60Q8IY21 AC022616.5-201ENST00000518796 181 ntBASIC30.08■■■□□ 2.41
DDX60Q8IY21 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC30.08■■■□□ 2.41
DDX60Q8IY21 AL592295.1-201ENST00000400984 884 ntBASIC30.07■■■□□ 2.4
DDX60Q8IY21 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
DDX60Q8IY21 AC019069.1-201ENST00000610008 1333 ntBASIC30.06■■■□□ 2.4
DDX60Q8IY21 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
DDX60Q8IY21 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
DDX60Q8IY21 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
DDX60Q8IY21 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
DDX60Q8IY21 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC30.06■■■□□ 2.4
DDX60Q8IY21 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
DDX60Q8IY21 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
DDX60Q8IY21 THA1P-201ENST00000590384 1145 ntBASIC30.05■■■□□ 2.4
DDX60Q8IY21 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC30.05■■■□□ 2.4
DDX60Q8IY21 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
DDX60Q8IY21 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
DDX60Q8IY21 KRT18P10-201ENST00000388836 1287 ntBASIC30.05■■■□□ 2.4
DDX60Q8IY21 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
DDX60Q8IY21 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC30.04■■■□□ 2.4
DDX60Q8IY21 SHF-208ENST00000560734 1731 ntTSL 3 BASIC30.04■■■□□ 2.4
DDX60Q8IY21 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC30.03■■■□□ 2.4
DDX60Q8IY21 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC30.03■■■□□ 2.4
DDX60Q8IY21 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC30.03■■■□□ 2.4
DDX60Q8IY21 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
DDX60Q8IY21 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC30.03■■■□□ 2.4
DDX60Q8IY21 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC30.03■■■□□ 2.4
DDX60Q8IY21 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC30.02■■■□□ 2.4
DDX60Q8IY21 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
DDX60Q8IY21 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
DDX60Q8IY21 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC30.02■■■□□ 2.4
DDX60Q8IY21 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
DDX60Q8IY21 AL356441.2-201ENST00000443009 864 ntBASIC30.01■■■□□ 2.39
DDX60Q8IY21 CREM-229ENST00000474362 1030 ntTSL 2 BASIC30.01■■■□□ 2.39
DDX60Q8IY21 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC30.01■■■□□ 2.39
DDX60Q8IY21 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
DDX60Q8IY21 AC239859.2-201ENST00000444165 318 ntBASIC30■■■□□ 2.39
DDX60Q8IY21 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC30■■■□□ 2.39
DDX60Q8IY21 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC30■■■□□ 2.39
DDX60Q8IY21 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC29.99■■■□□ 2.39
DDX60Q8IY21 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC29.99■■■□□ 2.39
DDX60Q8IY21 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
DDX60Q8IY21 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
DDX60Q8IY21 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC29.99■■■□□ 2.39
DDX60Q8IY21 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC29.99■■■□□ 2.39
DDX60Q8IY21 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
DDX60Q8IY21 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
DDX60Q8IY21 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC29.98■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms